RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 HACD1B0YJ81 288 aa14.71□□□□□ -0.05
MCF2L-228ENST00000487354 H7C0S8 307 aa14.71□□□□□ -0.05
MCF2L-228ENST00000487354 DSCR3O14972 297 aa14.71□□□□□ -0.05
MCF2L-228ENST00000487354 SNRPB2P08579 225 aaKnown RBP14.71□□□□□ -0.05
MCF2L-228ENST00000487354 ALAS2P22557 587 aa14.71□□□□□ -0.05
MCF2L-228ENST00000487354 PSMB4P28070 264 aa14.71□□□□□ -0.05
MCF2L-228ENST00000487354 PKLRP30613 574 aa14.71□□□□□ -0.05
MCF2L-228ENST00000487354 SRSF11Q05519 484 aaKnown RBP14.71□□□□□ -0.05
MCF2L-228ENST00000487354 DBN1Q16643 649 aa14.71□□□□□ -0.05
MCF2L-228ENST00000487354 GPR33Q49SQ1 333 aa14.71□□□□□ -0.05
MCF2L-228ENST00000487354 NAPRTQ6XQN6 538 aa14.71□□□□□ -0.05
MCF2L-228ENST00000487354 HOOK3Q86VS8 718 aa14.71□□□□□ -0.05
MCF2L-228ENST00000487354 KLHDC8BQ8IXV7 354 aa14.71□□□□□ -0.05
MCF2L-228ENST00000487354 TBC1D21Q8IYX1 336 aa14.71□□□□□ -0.05
MCF2L-228ENST00000487354 IQCDQ96DY2 449 aa14.71□□□□□ -0.05
MCF2L-228ENST00000487354 LMF1Q96S06 567 aa14.71□□□□□ -0.05
MCF2L-228ENST00000487354 GOLPH3Q9H4A6 298 aa14.71□□□□□ -0.05
MCF2L-228ENST00000487354 VPS37BQ9H9H4 285 aa14.71□□□□□ -0.05
MCF2L-228ENST00000487354 ASF1AQ9Y294 204 aa14.71□□□□□ -0.05
MCF2L-228ENST00000487354 SLC5A10A0PJK1 596 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 LIN7AO14910 233 aaPredicted RBP14.7□□□□□ -0.06
MCF2L-228ENST00000487354 ANXA9O76027 345 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 WISP2O76076 250 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 CRTAMO95727 393 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 MST1P26927 711 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 HTR1EP28566 365 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 SLC1A1P43005 524 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 OR1D4P47884 311 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 TNFSF10P50591 281 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 UBASH3AP57075 661 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 KRTAP10-9P60411 292 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 GRB7Q14451 532 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 KIR2DS3Q14952 304 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 TCEAL1Q15170 157 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 CDSNQ15517 529 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 TFDP3Q5H9I0 405 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 LUZP1Q86V48 1076 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 MCATQ8IVS2 390 aaKnown RBP14.7□□□□□ -0.06
MCF2L-228ENST00000487354 RHOT2Q8IXI1 618 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 METTL27Q8N6F8 245 aaPredicted RBP14.7□□□□□ -0.06
MCF2L-228ENST00000487354 AMER2Q8N7J2 671 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 OR1N1Q8NGS0 311 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 DLG3Q92796 817 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 DNAJC7Q99615 494 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 SEMA3GQ9NS98 782 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 CUTCQ9NTM9 273 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 SPTLC3Q9NUV7 552 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 IRAK4Q9NWZ3 460 aa14.7□□□□□ -0.06
MCF2L-228ENST00000487354 TDRKHQ9Y2W6 561 aaKnown RBP14.7□□□□□ -0.06
MCF2L-228ENST00000487354 FITM1A5D6W6 292 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 ISM1B1AKI9 464 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 C19orf84I3L1E1 186 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 PSTPIP1O43586 416 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 AP2A2O94973 939 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 AP2A1O95782 977 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 MBD3O95983 291 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 HPP00738 406 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 GSTM1P09488 218 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 ARSFP54793 590 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 ADORA2A-AS1P86434 159 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 GSTM4Q03013 218 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 SPARCL1Q14515 664 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 RBBP7Q16576 425 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 MRGPRGQ86SM5 289 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 ZNF808Q8N4W9 903 aaPredicted RBP14.69□□□□□ -0.06
MCF2L-228ENST00000487354 C8orf44Q96CB5 159 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 RUBCNLQ9H714 662 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 ARNT2Q9HBZ2 717 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 ZNF160Q9HCG1 818 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 PLA2G3Q9NZ20 509 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 POLG2Q9UHN1 485 aa14.69□□□□□ -0.06
MCF2L-228ENST00000487354 A0A1W2PQ72 361 aa14.68□□□□□ -0.06
MCF2L-228ENST00000487354 NRP2O60462 931 aa14.68□□□□□ -0.06
MCF2L-228ENST00000487354 COX6A1P12074 109 aa14.68□□□□□ -0.06
MCF2L-228ENST00000487354 CA7P43166 264 aa14.68□□□□□ -0.06
MCF2L-228ENST00000487354 KLC1Q07866 573 aa14.68□□□□□ -0.06
MCF2L-228ENST00000487354 BRD3Q15059 726 aa14.68□□□□□ -0.06
MCF2L-228ENST00000487354 INAQ16352 499 aa14.68□□□□□ -0.06
MCF2L-228ENST00000487354 KRTAP21-3Q3LHN1 58 aa14.68□□□□□ -0.06
MCF2L-228ENST00000487354 ANKRD20A2Q5SQ80 823 aa14.68□□□□□ -0.06
MCF2L-228ENST00000487354 ANKRD20A1Q5TYW2 823 aa14.68□□□□□ -0.06
MCF2L-228ENST00000487354 ANKRD20A3Q5VUR7 823 aa14.68□□□□□ -0.06
MCF2L-228ENST00000487354 IRAK1BP1Q5VVH5 260 aa14.68□□□□□ -0.06
MCF2L-228ENST00000487354 ATG9BQ674R7 924 aa14.68□□□□□ -0.06
MCF2L-228ENST00000487354 BBS12Q6ZW61 710 aa14.68□□□□□ -0.06
MCF2L-228ENST00000487354 KATNAL2Q8IYT4 538 aa14.68□□□□□ -0.06
MCF2L-228ENST00000487354 ELMO1Q92556 727 aa14.68□□□□□ -0.06
MCF2L-228ENST00000487354 MAGEB10Q96LZ2 347 aaPredicted RBP14.68□□□□□ -0.06
MCF2L-228ENST00000487354 CHP1Q99653 195 aa14.68□□□□□ -0.06
MCF2L-228ENST00000487354 TBL1YQ9BQ87 522 aa14.68□□□□□ -0.06
MCF2L-228ENST00000487354 NLE1Q9NVX2 485 aaPredicted RBP14.68□□□□□ -0.06
MCF2L-228ENST00000487354 NXT1Q9UKK6 140 aaKnown RBP14.68□□□□□ -0.06
MCF2L-228ENST00000487354 HEATR5BQ9P2D3 2071 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 ZNF469Q96JG9 3925 aaPredicted RBP14.67□□□□□ -0.06
MCF2L-228ENST00000487354 SCN2AQ99250 2005 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 SPOPO43791 374 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 CTSVO60911 334 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 CELA2AP08217 269 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 PSMA3P25788 255 aa14.67□□□□□ -0.06
MCF2L-228ENST00000487354 GRIA3P42263 894 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms