RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ZIC1Q15915 447 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 CA9Q16790 459 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 TAF3Q5VWG9 929 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 TMEM211Q6ICI0 200 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 C16orf47Q6ZP98 133 aaPredicted RBP11.16□□□□□ -0.62
TRIM56-204ENST00000487252 RIPOR1Q6ZS17 1223 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 NOP9Q86U38 636 aaKnown RBP11.16□□□□□ -0.62
TRIM56-204ENST00000487252 BBS5Q8N3I7 341 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 CCHCR1Q8TD31 782 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 VPS35Q96QK1 796 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 SOX17Q9H6I2 414 aaPredicted RBP11.16□□□□□ -0.62
TRIM56-204ENST00000487252 ZFYVE1Q9HBF4 777 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 BEX4Q9NWD9 120 aaPredicted RBP11.16□□□□□ -0.62
TRIM56-204ENST00000487252 CTSFQ9UBX1 484 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 NOCTQ9UK39 431 aaKnown RBP11.16□□□□□ -0.62
TRIM56-204ENST00000487252 DNAJC12Q9UKB3 198 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 RAB21Q9UL25 225 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 TGP01266 2768 aa11.16□□□□□ -0.62
TRIM56-204ENST00000487252 PKD1L1Q8TDX9 2849 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 A0A1B0GX78 115 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 A6NNC1 897 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 BTN3A1O00481 513 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 AKR1B10O60218 316 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 POP7O75817 140 aaKnown RBP11.15□□□□□ -0.62
TRIM56-204ENST00000487252 HCAR3P49019 387 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 POLR2FP61218 127 aaKnown RBP11.15□□□□□ -0.62
TRIM56-204ENST00000487252 DPYSQ14117 519 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 BRD3Q15059 726 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 DEFB110Q30KQ9 67 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 TEX35Q5T0J7 233 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 MARC1Q5VT66 337 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 KLHDC7AQ5VTJ3 777 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 HMBOX1Q6NT76 420 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 PODNL1Q6PEZ8 512 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 GBP6Q6ZN66 633 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 SHISA6Q6ZSJ9 500 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 NDUFAF7Q7L592 441 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 ZNF572Q7Z3I7 529 aaPredicted RBP11.15□□□□□ -0.62
TRIM56-204ENST00000487252 CCDC71Q8IV32 467 aaPredicted RBP11.15□□□□□ -0.62
TRIM56-204ENST00000487252 RNF10Q8N5U6 811 aaKnown RBP11.15□□□□□ -0.62
TRIM56-204ENST00000487252 C19orf47Q8N9M1 422 aaKnown RBP11.15□□□□□ -0.62
TRIM56-204ENST00000487252 RND1Q92730 232 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 SCMH1Q96GD3 660 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 C12orf66Q96MD2 445 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 PARD6BQ9BYG5 372 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 NENFQ9UMX5 172 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 TFR2Q9UP52 801 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 AP4E1Q9UPM8 1137 aa11.15□□□□□ -0.62
TRIM56-204ENST00000487252 DNMT3AQ9Y6K1 912 aaPredicted RBP11.15□□□□□ -0.62
TRIM56-204ENST00000487252 TCRBV5S1A1TA0A578 114 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 CTAGE15A4D2H0 777 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 SIGLEC16A6NMB1 481 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 BTNL10A8MVZ5 291 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 MAP2K7O14733 419 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 TTI1O43156 1089 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 TUBBP07437 444 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 MMEP08473 750 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 CTAGE8P0CG41 777 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 PIM1P11309 404 aaPredicted RBP11.14□□□□□ -0.63
TRIM56-204ENST00000487252 NDUFS1P28331 727 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 PRKCIP41743 596 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 MAGEA1P43355 309 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 CARSP49589 748 aaKnown RBP11.14□□□□□ -0.63
TRIM56-204ENST00000487252 CDH6P55285 790 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 JAM2P57087 298 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 QPCTQ16769 361 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 EXOC3L4Q17RC7 722 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 ALS2CLQ60I27 953 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 TXNRD3NBQ6F5E7 133 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 ARSKQ6UWY0 536 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 IRF2BP2Q7Z5L9 587 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 CTAGE6Q86UF2 777 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 CXorf67Q86X51 503 aaPredicted RBP11.14□□□□□ -0.63
TRIM56-204ENST00000487252 CTAGE4Q8IX94 777 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 MDS2Q8NDY4 140 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 ACVR1CQ8NER5 493 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 LPCAT1Q8NF37 534 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 TRIM58Q8NG06 486 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 FAM57AQ8TBR7 257 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 N4BP2L2Q92802 583 aaPredicted RBP11.14□□□□□ -0.63
TRIM56-204ENST00000487252 C8orf44Q96CB5 159 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 SEC16BQ96JE7 1060 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 WWP1Q9H0M0 922 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 SRMSQ9H3Y6 488 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 PLEKHF2Q9H8W4 249 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 ANKZF1Q9H8Y5 726 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 PCDH9Q9HC56 1237 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 ENAMQ9NRM1 1142 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 JRKLQ9Y4A0 524 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 SAR1BQ9Y6B6 198 aa11.14□□□□□ -0.63
TRIM56-204ENST00000487252 BZW2Q9Y6E2 419 aaKnown RBP11.14□□□□□ -0.63
TRIM56-204ENST00000487252 ARID1AO14497 2285 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 NSG1A0A0A6YYJ2 146 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 CCDC151A5D8V7 595 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 ANKRD66B4E2M5 251 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 CELA2AP08217 269 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 UCHL3P15374 230 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 CD53P19397 219 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 NSG1P42857 185 aa11.13□□□□□ -0.63
TRIM56-204ENST00000487252 DCAF7P61962 342 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms