RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ARSFP54793 590 aa18.67■□□□□ 0.58
SMPDL3A-202ENST00000487215 EIF3EP60228 445 aaKnown RBP18.67■□□□□ 0.58
SMPDL3A-202ENST00000487215 NKG7Q16617 165 aa18.67■□□□□ 0.58
SMPDL3A-202ENST00000487215 TMTC1Q8IUR5 882 aa18.67■□□□□ 0.58
SMPDL3A-202ENST00000487215 MCATQ8IVS2 390 aaKnown RBP18.67■□□□□ 0.58
SMPDL3A-202ENST00000487215 PARP9Q8IXQ6 854 aa18.67■□□□□ 0.58
SMPDL3A-202ENST00000487215 PPP1R2P1Q96PQ5 205 aa18.67■□□□□ 0.58
SMPDL3A-202ENST00000487215 PHF12Q96QT6 1004 aa18.67■□□□□ 0.58
SMPDL3A-202ENST00000487215 LHPPQ9H008 270 aa18.67■□□□□ 0.58
SMPDL3A-202ENST00000487215 EPS8L2Q9H6S3 715 aa18.67■□□□□ 0.58
SMPDL3A-202ENST00000487215 CCDC78A2IDD5 438 aa18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 QSOX1O00391 747 aa18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 PJA2O43164 708 aa18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 STSP08842 583 aa18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 TPH1P17752 444 aa18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 PKLRP30613 574 aa18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 ITIH4Q14624 930 aa18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 NAA30Q147X3 362 aaPredicted RBP18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 TLR1Q15399 786 aa18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 TUBB8Q3ZCM7 444 aa18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 SYTL3Q4VX76 610 aa18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 SP5Q6BEB4 398 aaPredicted RBP18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 C11orf63Q6NUN7 778 aa18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 DARS2Q6PI48 645 aaKnown RBP18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 SHISA6Q6ZSJ9 500 aa18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 VSTM4Q8IW00 320 aa18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 LRRC45Q96CN5 670 aa18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 MOCOSQ96EN8 888 aa18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 SLX1AQ9BQ83 275 aa18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 SLC26A1Q9H2B4 701 aa18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 SOX17Q9H6I2 414 aaPredicted RBP18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 MRM3Q9HC36 420 aaKnown RBP18.66■□□□□ 0.58
SMPDL3A-202ENST00000487215 PRSS44E7EML9 344 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 DSCR3O14972 297 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 KDM1AO60341 852 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 PIM1P11309 404 aaPredicted RBP18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 MCM3P25205 808 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 CTNNA2P26232 953 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 MAGEA1P43355 309 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 RAB28P51157 221 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 COPS2P61201 443 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 Q0VFX4 171 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 POU6F1Q14863 301 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 KCTD11Q693B1 232 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 FAM180AQ6UWF9 173 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 PACS1Q6VY07 963 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 FJX1Q86VR8 437 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 LINC01555Q8NAE3 123 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 DENND1AQ8TEH3 1009 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 STYXQ8WUJ0 223 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 CUTCQ9NTM9 273 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 CTSFQ9UBX1 484 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 TFR2Q9UP52 801 aa18.65■□□□□ 0.58
SMPDL3A-202ENST00000487215 A0A1B0GUH1 482 aa18.64■□□□□ 0.57
SMPDL3A-202ENST00000487215 OR51F1A6NGY5 319 aa18.64■□□□□ 0.57
SMPDL3A-202ENST00000487215 MSNP26038 577 aaKnown RBP18.64■□□□□ 0.57
SMPDL3A-202ENST00000487215 PLOD1Q02809 727 aaPredicted RBP18.64■□□□□ 0.57
SMPDL3A-202ENST00000487215 RBBP7Q16576 425 aa18.64■□□□□ 0.57
SMPDL3A-202ENST00000487215 LINC00696Q6ZRV3 163 aa18.64■□□□□ 0.57
SMPDL3A-202ENST00000487215 LMNTD1Q8N9Z9 388 aa18.64■□□□□ 0.57
SMPDL3A-202ENST00000487215 OR11G2Q8NGC1 345 aa18.64■□□□□ 0.57
SMPDL3A-202ENST00000487215 THOC3Q96J01 351 aaKnown RBP18.64■□□□□ 0.57
SMPDL3A-202ENST00000487215 MENTQ9BUN1 341 aa18.64■□□□□ 0.57
SMPDL3A-202ENST00000487215 OSBPL8Q9BZF1 889 aa18.64■□□□□ 0.57
SMPDL3A-202ENST00000487215 IMPACTQ9P2X3 320 aa18.64■□□□□ 0.57
SMPDL3A-202ENST00000487215 NXT1Q9UKK6 140 aaKnown RBP18.64■□□□□ 0.57
SMPDL3A-202ENST00000487215 EFR3BQ9Y2G0 817 aa18.64■□□□□ 0.57
SMPDL3A-202ENST00000487215 OTOGQ6ZRI0 2925 aa18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 MDC1Q14676 2089 aaKnown RBP18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 ANKRD12Q6UB98 2062 aa18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 FOXN2P32314 431 aa18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 CTNNA1P35221 906 aaKnown RBP18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 CSE1LP55060 971 aaKnown RBP18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 MFAP5Q13361 173 aa18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 GRM7Q14831 915 aa18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 FCRL6Q6DN72 434 aa18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 ISLR2Q6UXK2 745 aa18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 CNGA4Q8IV77 575 aa18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 MCEMP1Q8IX19 187 aa18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 C2orf73Q8N5S3 287 aaPredicted RBP18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 METTL27Q8N6F8 245 aaPredicted RBP18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 BCORP1Q8N888 145 aa18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 CATSPER1Q8NEC5 780 aa18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 MESP1Q9BRJ9 268 aa18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 LUC7LQ9NQ29 371 aaKnown RBP18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 SEMA3GQ9NS98 782 aa18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 OLAHQ9NV23 265 aa18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 PIH1D1Q9NWS0 290 aaKnown RBP18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 COPG2Q9UBF2 871 aa18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 CIDEBQ9UHD4 219 aa18.63■□□□□ 0.57
SMPDL3A-202ENST00000487215 SNRNP200O75643 2136 aaKnown RBP18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 VSTM2BA6NLU5 285 aa18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 JRKO75564 520 aa18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 KLHL18O94889 574 aa18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 OR56A5P0C7T3 313 aa18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 CD9P21926 228 aa18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 PSMA3P25788 255 aa18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 PTPN7P35236 360 aa18.62■□□□□ 0.57
SMPDL3A-202ENST00000487215 GRIA3P42263 894 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms