RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CRYBG2Q8N1P7 616 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 L3MBTL4Q8NA19 623 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 EXT2Q93063 718 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 ABHD8Q96I13 439 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 JAKMIP1Q96N16 626 aaKnown RBP4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 MUS81Q96NY9 551 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 LRRC3BQ96PB8 259 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 FEVQ99581 238 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 CITED2Q99967 270 aaPredicted RBP4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 THUMPD3Q9BV44 507 aaKnown RBP4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 EBF2Q9HAK2 575 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 ACKR4Q9NPB9 350 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 KLHL1Q9NR64 748 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 DAPK1P53355 1430 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 ADGRL3Q9HAR2 1447 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 MYOM2P54296 1465 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 USP32Q8NFA0 1604 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 TRAV34A0A0B4J273 112 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 MED19A0JLT2 244 aaPredicted RBP4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 FAM170AA1A519 330 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 ASPDHA6ND91 283 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 ANXA2P2A6NMY6 339 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 HSP90AB1P08238 724 aaKnown RBP4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 SNHG28P0DPA3 235 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 PDGFRAP16234 1089 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 CKMT2P17540 419 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 HOXC13P31276 330 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 TNNT3P45378 269 aaPredicted RBP4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 CAPZA1P52907 286 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 ART1P52961 327 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 MAPK12P53778 367 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 RPL24P83731 157 aaKnown RBP4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 DUOXA1Q1HG43 343 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 NADSYN1Q6IA69 706 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 MFSD12Q6NUT3 480 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 PRSS57Q6UWY2 283 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 RBM23Q86U06 439 aaKnown RBP4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 RNF128Q8TEB7 428 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 SORCS1Q8WY21 1168 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 SYN2Q92777 582 aaPredicted RBP4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 OTUB1Q96FW1 271 aaPredicted RBP4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 LYZL4Q96KX0 146 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 CPNE1Q99829 537 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 FERMT1Q9BQL6 677 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 FZD8Q9H461 694 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 Q9N2K0 584 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 PTTG2Q9NZH5 202 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 CPSF3Q9UKF6 684 aaKnown RBP4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 ABT1Q9ULW3 272 aaKnown RBP4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 POMT1Q9Y6A1 747 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 ABCC5O15440 1437 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 NUP188Q5SRE5 1749 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 NRAPQ86VF7 1730 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 C1orf167Q5SNV9 1468 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 RALGAPBQ86X10 1494 aa4.69□□□□□ -1.66
PRPF38A-203ENST00000487160 RGPD8O14715 1765 aaPredicted RBP4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 CHD4Q14839 1912 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 RREB1Q92766 1687 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 KIF1BO60333 1816 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 OR6C76A6NM76 312 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 CCDC188H7C350 402 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 TULP2O00295 520 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 WDR46O15213 610 aaKnown RBP4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 CLIC2O15247 247 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 INSIG1O15503 277 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 SYNCRIPO60506 623 aaKnown RBP4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 ACSL3O95573 720 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 SMIM18P0DKX4 95 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 CD22P20273 847 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 MUTP22033 750 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 EEF1B2P24534 225 aaKnown RBP4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 PTPN3P26045 913 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 PRKCIP41743 596 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 ASCL1P50553 236 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 BMXP51813 675 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 ZNF132P52740 706 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 ZXDBP98169 803 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 PRKCZQ05513 592 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 C6orf136Q5SQH8 315 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 MPP7Q5T2T1 576 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 C9orf57Q5W0N0 161 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 PRR27Q6MZM9 219 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 TUBA1AQ71U36 451 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 DSG4Q86SJ6 1040 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 SLC9B2Q86UD5 537 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 TLK2Q86UE8 772 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 ARHGAP24Q8N264 748 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 CPSF7Q8N684 471 aaKnown RBP4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 KCNE4Q8WWG9 221 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 FAM162AQ96A26 154 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 IL17FQ96PD4 163 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 EGFL8Q99944 293 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 TUBA1CQ9BQE3 449 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 DESI2Q9BSY9 194 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 KATNB1Q9BVA0 655 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 C1QTNF4Q9BXJ3 329 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 HIPK2Q9H2X6 1198 aa4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 C6orf106Q9H6K1 298 aaPredicted RBP4.68□□□□□ -1.66
PRPF38A-203ENST00000487160 DDX31Q9H8H2 851 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms