RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 DGCR14Q96DF8 476 aaKnown RBP12.92□□□□□ -0.34
HMGN1-216ENST00000486741 CCDC177Q9NQR7 707 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-216ENST00000486741 PDP1Q9P0J1 537 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-216ENST00000486741 VPS29Q9UBQ0 182 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 RPS6KA6Q9UK32 745 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 CLEC4EQ9ULY5 219 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 ZNFX1Q9P2E3 1918 aaKnown RBP12.92□□□□□ -0.34
HMGN1-216ENST00000486741 SMIM31A0A1B0GVY4 71 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 LIN7AO14910 233 aaPredicted RBP12.91□□□□□ -0.34
HMGN1-216ENST00000486741 KDM1AO60341 852 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 OR6B1O95007 311 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 FGF19O95750 216 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 BCL10O95999 233 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 PPP2R1BP30154 601 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 CPOXP36551 454 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 TRAP1Q12931 704 aaKnown RBP12.91□□□□□ -0.34
HMGN1-216ENST00000486741 CCDC85BQ15834 202 aaPredicted RBP12.91□□□□□ -0.34
HMGN1-216ENST00000486741 THOC6Q86W42 341 aaKnown RBP12.91□□□□□ -0.34
HMGN1-216ENST00000486741 OTUB1Q96FW1 271 aaPredicted RBP12.91□□□□□ -0.34
HMGN1-216ENST00000486741 UBXN10Q96LJ8 280 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 EQTNQ9NQ60 294 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 PCDHGA11Q9Y5H2 935 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 CTSAP10619 480 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 HMGA1P17096 107 aaKnown RBP12.91□□□□□ -0.34
HMGN1-216ENST00000486741 HLA-FP30511 346 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 PAGE3Q5JUK9 113 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 VANGL1Q8TAA9 524 aaPredicted RBP12.91□□□□□ -0.34
HMGN1-216ENST00000486741 XAGE5Q8WWM1 108 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 PROX1Q92786 737 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 ATOH8Q96SQ7 321 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 GORASP1Q9BQQ3 440 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 ZIM2Q9NZV7 527 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 ERVW-1Q9UQF0 538 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 MAGEB17A8MXT2 336 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 NME4O00746 187 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 UBFD1O14562 309 aaKnown RBP12.91□□□□□ -0.34
HMGN1-216ENST00000486741 THRBP10828 461 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 DGKEP52429 567 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 SPIBQ01892 262 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 TLR1Q15399 786 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 PDE12Q6L8Q7 609 aaKnown RBP12.91□□□□□ -0.34
HMGN1-216ENST00000486741 CHSY3Q70JA7 882 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 OOSP2Q86WS3 158 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 HDDC3Q8N4P3 179 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 AADATQ8N5Z0 425 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 ZNF540Q8NDQ6 660 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 BPIFB1Q8TDL5 484 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 NUS1Q96E22 293 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 FBXL20Q96IG2 436 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 APOL4Q9BPW4 351 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 AMBNQ9NP70 447 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 MSRAQ9UJ68 235 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 PCDHGA7Q9Y5G6 932 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 AQP12BA6NM10 295 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 RGS5O15539 181 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 OR1F1O43749 312 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 DNTTP04053 509 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 PRPS2P11908 318 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 RPS6KA3P51812 740 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 OR4D2P58180 307 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 EMX2Q04743 252 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 LIMS2Q7Z4I7 341 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 GALNT10Q86SR1 603 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 AQP12AQ8IXF9 295 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 TRPV3Q8NET8 790 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 FIBINQ8TAL6 211 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 NACC2Q96BF6 587 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 L3HYPDHQ96EM0 354 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 PHF12Q96QT6 1004 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 RAD9AQ99638 391 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 CCDC3Q9BQI4 270 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 KRT84Q9NSB2 600 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 ELOVL2Q9NXB9 296 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 ACTR3BQ9P1U1 418 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 TESMINQ9Y4I5 508 aa12.91□□□□□ -0.34
HMGN1-216ENST00000486741 ALDOCP09972 364 aaKnown RBP12.9□□□□□ -0.34
HMGN1-216ENST00000486741 ACADVLP49748 655 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 RPL26P61254 145 aaKnown RBP12.9□□□□□ -0.34
HMGN1-216ENST00000486741 HSPB3Q12988 150 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 LDLRAP1Q5SW96 308 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 KBTBD6Q86V97 674 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 ZDHHC21Q8IVQ6 265 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 TEX26Q8N6G2 289 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 TMCO5AQ8N6Q1 288 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 STARD8Q92502 1023 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 UBE2E3Q969T4 207 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 SCRN2Q96FV2 425 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 DUSP26Q9BV47 211 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 SLAMF8Q9P0V8 285 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 NCKAP1Q9Y2A7 1128 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 CLIC1O00299 241 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 PDYNP01213 254 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 APODP05090 189 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 NR2F1P10589 423 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 GDI1P31150 447 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 CLCN4P51793 760 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 MERTKQ12866 999 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 GTDC1Q4AE62 458 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 ATAT1Q5SQI0 421 aa12.9□□□□□ -0.34
HMGN1-216ENST00000486741 BLOC1S3Q6QNY0 202 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms