RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 CLIC2O15247 247 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 AP5Z1O43299 807 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 STX6O43752 255 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 CTSVO60911 334 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 WDPCPO95876 746 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 ATP1A1P05023 1023 aaKnown RBP4.26□□□□□ -1.73
SMC4-218ENST00000486711 VIMP08670 466 aaKnown RBP4.26□□□□□ -1.73
SMC4-218ENST00000486711 CD22P20273 847 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 PTPN3P26045 913 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 EPHA2P29317 976 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 ATP5DP30049 168 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 THOP1P52888 689 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 CCDC184Q52MB2 194 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 SYT14P1Q58G82 188 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 MPP7Q5T2T1 576 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 SHEQ5VZ18 495 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 ZNF852Q6ZMS4 543 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 NUP54Q7Z3B4 507 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 DSG4Q86SJ6 1040 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 ZNF554Q86TJ5 538 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 NUDT13Q86X67 352 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 IQCA1Q86XH1 822 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 POC1AQ8NBT0 407 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 OR13A1Q8NGR1 328 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 C9orf43Q8TAL5 461 aaPredicted RBP4.26□□□□□ -1.73
SMC4-218ENST00000486711 GDAP1Q8TB36 358 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 ZNF473Q8WTR7 871 aaKnown RBP4.26□□□□□ -1.73
SMC4-218ENST00000486711 CD101Q93033 1021 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 WBP2Q969T9 261 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 SCRN2Q96FV2 425 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 FNBP1Q96RU3 617 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 INPP5KQ9BT40 448 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 PRRG4Q9BZD6 226 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 MIS12Q9H081 205 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 CDH20Q9HBT6 801 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 Q9N2K0 584 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 ECHDC1Q9NTX5 307 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 SPHK1Q9NYA1 384 aa4.26□□□□□ -1.73
SMC4-218ENST00000486711 FAF1Q9UNN5 650 aaPredicted RBP4.26□□□□□ -1.73
SMC4-218ENST00000486711 ZFP37Q9Y6Q3 630 aaPredicted RBP4.26□□□□□ -1.73
SMC4-218ENST00000486711 LUC7L3O95232 432 aaKnown RBP4.25□□□□□ -1.73
SMC4-218ENST00000486711 SIX3O95343 332 aaPredicted RBP4.25□□□□□ -1.73
SMC4-218ENST00000486711 TGDSO95455 350 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 PLA2G4BP0C869 781 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 SMIM18P0DKX4 95 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 CASTP20810 708 aaKnown RBP4.25□□□□□ -1.73
SMC4-218ENST00000486711 KRT2P35908 639 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 HSD17B3P37058 310 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 MNDAP41218 407 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 CRKLP46109 303 aaKnown RBP4.25□□□□□ -1.73
SMC4-218ENST00000486711 NR2C2P49116 596 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 NAGLUP54802 743 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 DMPKQ09013 629 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 ILF3Q12906 894 aaKnown RBP eCLIP4.25□□□□□ -1.73
SMC4-218ENST00000486711 UGCGQ16739 394 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 TWISTNBQ3B726 338 aaPredicted RBP4.25□□□□□ -1.73
SMC4-218ENST00000486711 ACCSLQ4AC99 568 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 MCMDC2Q4G0Z9 681 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 FAM91A1Q658Y4 838 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 CORO6Q6QEF8 472 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 MEX3BQ6ZN04 569 aaKnown RBP4.25□□□□□ -1.73
SMC4-218ENST00000486711 KLHL7Q8IXQ5 586 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 TMCO5AQ8N6Q1 288 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 THAP8Q8NA92 274 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 DMBX1Q8NFW5 382 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 OR2T12Q8NG77 320 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 OR13J1Q8NGT2 312 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 SPATA20Q8TB22 786 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 IRGQQ8WZA9 623 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 NSL1Q96IY1 281 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 C17orf77Q96MU5 243 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 EPYCQ99645 322 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 RTP3Q9BQQ7 232 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 ARRDC1-AS1Q9H2J1 176 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 COPS7BQ9H9Q2 264 aaPredicted RBP4.25□□□□□ -1.73
SMC4-218ENST00000486711 ZBTB20Q9HC78 741 aaPredicted RBP4.25□□□□□ -1.73
SMC4-218ENST00000486711 DDX43Q9NXZ2 648 aaKnown RBP4.25□□□□□ -1.73
SMC4-218ENST00000486711 TXNDC16Q9P2K2 825 aa4.25□□□□□ -1.73
SMC4-218ENST00000486711 NOTCH3Q9UM47 2321 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 PCDH11YQ9BZA8 1340 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 PRR23AA6NEV1 266 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 ENO4A6NNW6 628 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 PSMD14O00487 310 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 NR3C1P04150 777 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 CSN3P07498 182 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 HAPLN1P10915 354 aaPredicted RBP4.24□□□□□ -1.73
SMC4-218ENST00000486711 HSPA8P11142 646 aaKnown RBP4.24□□□□□ -1.73
SMC4-218ENST00000486711 IRF2P14316 349 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 AMD1P17707 334 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 GNAZP19086 355 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 JAK1P23458 1154 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 PTGER4P35408 488 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 SOAT1P35610 550 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 CDH11P55287 796 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 DLK1P80370 383 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 MAT1AQ00266 395 aaKnown RBP4.24□□□□□ -1.73
SMC4-218ENST00000486711 TUBB2AQ13885 445 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 VEZF1Q14119 521 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 TAF13Q15543 124 aa4.24□□□□□ -1.73
SMC4-218ENST00000486711 LRRC73Q5JTD7 316 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms