RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 NIPAL4Q0D2K0 466 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 ATP13A5Q4VNC0 1218 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 ATP13A4Q4VNC1 1196 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 ZNF766Q5HY98 468 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 ERMARDQ5T6L9 678 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 TMC3Q7Z5M5 1100 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 TRIM73Q86UV7 250 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 ZZZ3Q8IYH5 903 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 EID3Q8N140 333 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 GHDCQ8N2G8 530 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 ATPAF2Q8N5M1 289 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.88□□□□□ -1.15
XRN1-212ENST00000486211 AMER2Q8N7J2 671 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 ACVR1CQ8NER5 493 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 SUN3Q8TAQ9 357 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 SMARCE1Q969G3 411 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 C8orf44Q96CB5 159 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 VPS50Q96JG6 964 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 RMDN2Q96LZ7 410 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 FRMD6Q96NE9 622 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 MCEEQ96PE7 176 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 PCDHB18PQ96TA0 734 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 PHACTR1Q9C0D0 580 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 POLR1EQ9GZS1 481 aaKnown RBP7.88□□□□□ -1.15
XRN1-212ENST00000486211 SRMSQ9H3Y6 488 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 DEF6Q9H4E7 631 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 SEPT11Q9NVA2 429 aaKnown RBP7.88□□□□□ -1.15
XRN1-212ENST00000486211 FANCLQ9NW38 375 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 NXT1Q9UKK6 140 aaKnown RBP7.88□□□□□ -1.15
XRN1-212ENST00000486211 EDARQ9UNE0 448 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 CUBNO60494 3623 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 ZANQ9Y493 2812 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 A0A1B0GX78 115 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 MAP2K7O14733 419 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 SMC2O95347 1197 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 MLYCDO95822 493 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 PYGMP11217 842 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 NDUFS1P28331 727 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 PPP1R2P41236 205 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 CDR2Q01850 454 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 ITKQ08881 620 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 GTF2H3Q13889 308 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 PPP6R3Q5H9R7 873 aaPredicted RBP7.87□□□□□ -1.15
XRN1-212ENST00000486211 SPESP1Q6UW49 350 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 MON1BQ7L1V2 547 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 NDUFAF7Q7L592 441 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 ZNF677Q86XU0 584 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 CCDC71Q8IV32 467 aaPredicted RBP7.87□□□□□ -1.15
XRN1-212ENST00000486211 ADGRF3Q8IZF5 1079 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 FMR1NBQ8N0W7 255 aaPredicted RBP7.87□□□□□ -1.15
XRN1-212ENST00000486211 CLYBLQ8N0X4 340 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 RPRMLQ8N4K4 120 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 DNAJC22Q8N4W6 341 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 MDS2Q8NDY4 140 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 SIMC1Q8NDZ2 872 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 NSMCE1Q8WV22 266 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 LCN9Q8WX39 176 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 N4BP2L2Q92802 583 aaPredicted RBP7.87□□□□□ -1.15
XRN1-212ENST00000486211 PWWP2AQ96N64 755 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 HES7Q9BYE0 225 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 ACTR10Q9NZ32 417 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 ADAM22Q9P0K1 906 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 MAN1B1Q9UKM7 699 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 SHOC2Q9UQ13 582 aa7.87□□□□□ -1.15
XRN1-212ENST00000486211 NSG1A0A0A6YYJ2 146 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 OR2AG2A6NM03 316 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 C2orf74A8MZ97 194 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 F8VZ95 297 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 H7C1Q1 480 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 PRPSAP2O60256 369 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 GADD45BO75293 160 aaPredicted RBP7.86□□□□□ -1.15
XRN1-212ENST00000486211 CRLF1O75462 422 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 MT-CYBP00156 380 aaPredicted RBP7.86□□□□□ -1.15
XRN1-212ENST00000486211 MMP2P08253 660 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 PIRTP0C851 137 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 MYBL2P10244 700 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 ITGAMP11215 1152 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 CES1P23141 567 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 PBLDP30039 288 aaPredicted RBP7.86□□□□□ -1.15
XRN1-212ENST00000486211 NSG1P42857 185 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 ARSEP51690 589 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 NKX6-1P78426 367 aaPredicted RBP7.86□□□□□ -1.15
XRN1-212ENST00000486211 KLC1Q07866 573 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 KLHDC7AQ5VTJ3 777 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 SHEQ5VZ18 495 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 TXNRD3NBQ6F5E7 133 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 TMEM220Q6QAJ8 160 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 TTLL10Q6ZVT0 673 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 PHF13Q86YI8 300 aaPredicted RBP7.86□□□□□ -1.15
XRN1-212ENST00000486211 DTWD1Q8N5C7 304 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 FLVCR1-AS1Q8TAF5 88 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 FAM57AQ8TBR7 257 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 BRSK1Q8TDC3 778 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 MAML1Q92585 1016 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 SCMH1Q96GD3 660 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 CCDC34Q96HJ3 373 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 SEC16BQ96JE7 1060 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 SIGLEC12Q96PQ1 595 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 TUBGCP2Q9BSJ2 902 aa7.86□□□□□ -1.15
XRN1-212ENST00000486211 CRB3Q9BUF7 120 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms