RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 NDOR1Q9UHB4 597 aa24.74■■□□□ 1.55
HLA-F-227ENST00000485513 CIDEBQ9UHD4 219 aa24.74■■□□□ 1.55
HLA-F-227ENST00000485513 VPS4AQ9UN37 437 aa24.74■■□□□ 1.55
HLA-F-227ENST00000485513 PTRH2Q9Y3E5 179 aaKnown RBP24.74■■□□□ 1.55
HLA-F-227ENST00000485513 PCSK5Q92824 1860 aa24.74■■□□□ 1.55
HLA-F-227ENST00000485513 USP9XQ93008 2570 aaPredicted RBP24.74■■□□□ 1.55
HLA-F-227ENST00000485513 CD3EAPO15446 510 aaKnown RBP24.73■■□□□ 1.55
HLA-F-227ENST00000485513 SORBS2O94875 1100 aaKnown RBP24.73■■□□□ 1.55
HLA-F-227ENST00000485513 SLCO2B1O94956 709 aa24.73■■□□□ 1.55
HLA-F-227ENST00000485513 CD9P21926 228 aa24.73■■□□□ 1.55
HLA-F-227ENST00000485513 FOLR3P41439 243 aa24.73■■□□□ 1.55
HLA-F-227ENST00000485513 CRADDP78560 199 aa24.73■■□□□ 1.55
HLA-F-227ENST00000485513 PTRHD1Q6GMV3 140 aaKnown RBP24.73■■□□□ 1.55
HLA-F-227ENST00000485513 C2orf73Q8N5S3 287 aaPredicted RBP24.73■■□□□ 1.55
HLA-F-227ENST00000485513 NDC1Q9BTX1 674 aa24.73■■□□□ 1.55
HLA-F-227ENST00000485513 EURLQ9NYK6 297 aa24.73■■□□□ 1.55
HLA-F-227ENST00000485513 DRG1Q9Y295 367 aaKnown RBP24.73■■□□□ 1.55
HLA-F-227ENST00000485513 KLHL20Q9Y2M5 609 aa24.73■■□□□ 1.55
HLA-F-227ENST00000485513 PRRC2CQ9Y520 2896 aaKnown RBP24.73■■□□□ 1.55
HLA-F-227ENST00000485513 BASP1P80723 227 aaKnown RBP24.72■■□□□ 1.55
HLA-F-227ENST00000485513 GRB7Q14451 532 aa24.72■■□□□ 1.55
HLA-F-227ENST00000485513 SLC9A5Q14940 896 aa24.72■■□□□ 1.55
HLA-F-227ENST00000485513 NKAIN1Q4KMZ8 207 aa24.72■■□□□ 1.55
HLA-F-227ENST00000485513 DRICH1Q6PGQ1 229 aaPredicted RBP24.72■■□□□ 1.55
HLA-F-227ENST00000485513 C4orf22Q6V702 233 aa24.72■■□□□ 1.55
HLA-F-227ENST00000485513 LMNTD1Q8N9Z9 388 aa24.72■■□□□ 1.55
HLA-F-227ENST00000485513 GALNT11Q8NCW6 608 aa24.72■■□□□ 1.55
HLA-F-227ENST00000485513 GSDMBQ8TAX9 411 aa24.72■■□□□ 1.55
HLA-F-227ENST00000485513 IL17FQ96PD4 163 aa24.72■■□□□ 1.55
HLA-F-227ENST00000485513 PANX3Q96QZ0 392 aa24.72■■□□□ 1.55
HLA-F-227ENST00000485513 IL22Q9GZX6 179 aa24.72■■□□□ 1.55
HLA-F-227ENST00000485513 TREX1Q9NSU2 369 aa24.72■■□□□ 1.55
HLA-F-227ENST00000485513 GNPTGQ9UJJ9 305 aa24.72■■□□□ 1.55
HLA-F-227ENST00000485513 ANKRD12Q6UB98 2062 aa24.71■■□□□ 1.55
HLA-F-227ENST00000485513 USP9YO00507 2555 aaPredicted RBP24.71■■□□□ 1.55
HLA-F-227ENST00000485513 S1PR4O95977 384 aa24.71■■□□□ 1.55
HLA-F-227ENST00000485513 UQCRFS1P47985 274 aa24.71■■□□□ 1.55
HLA-F-227ENST00000485513 RAPSNQ13702 412 aa24.71■■□□□ 1.55
HLA-F-227ENST00000485513 JMJD6Q6NYC1 403 aaPredicted RBP24.71■■□□□ 1.55
HLA-F-227ENST00000485513 GSTA5Q7RTV2 222 aa24.71■■□□□ 1.55
HLA-F-227ENST00000485513 TAX1BP1Q86VP1 789 aa24.71■■□□□ 1.55
HLA-F-227ENST00000485513 MCATQ8IVS2 390 aaKnown RBP24.71■■□□□ 1.55
HLA-F-227ENST00000485513 MPP5Q8N3R9 675 aa24.71■■□□□ 1.55
HLA-F-227ENST00000485513 OR2Y1Q8NGV0 311 aa24.71■■□□□ 1.55
HLA-F-227ENST00000485513 OR2L8Q8NGY9 312 aa24.71■■□□□ 1.55
HLA-F-227ENST00000485513 DLG3Q92796 817 aa24.71■■□□□ 1.55
HLA-F-227ENST00000485513 FER1L6-AS2Q96M78 137 aa24.71■■□□□ 1.55
HLA-F-227ENST00000485513 SMAD5Q99717 465 aaKnown RBP24.71■■□□□ 1.55
HLA-F-227ENST00000485513 MFRPQ9BY79 579 aa24.71■■□□□ 1.55
HLA-F-227ENST00000485513 P2RY12Q9H244 342 aa24.71■■□□□ 1.55
HLA-F-227ENST00000485513 INTS7Q9NVH2 962 aaKnown RBP24.71■■□□□ 1.55
HLA-F-227ENST00000485513 BFARQ9NZS9 450 aa24.71■■□□□ 1.55
HLA-F-227ENST00000485513 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.71■■□□□ 1.55
HLA-F-227ENST00000485513 SLC39A10Q9ULF5 831 aa24.71■■□□□ 1.55
HLA-F-227ENST00000485513 ZKSCAN5Q9Y2L8 839 aa24.71■■□□□ 1.55
HLA-F-227ENST00000485513 MAP4K5Q9Y4K4 846 aa24.71■■□□□ 1.55
HLA-F-227ENST00000485513 AP3B1O00203 1094 aa24.7■■□□□ 1.54
HLA-F-227ENST00000485513 PEX12O00623 359 aa24.7■■□□□ 1.54
HLA-F-227ENST00000485513 RASGRF2O14827 1237 aa24.7■■□□□ 1.54
HLA-F-227ENST00000485513 NDUFS3O75489 264 aa24.7■■□□□ 1.54
HLA-F-227ENST00000485513 NPY2RP49146 381 aa24.7■■□□□ 1.54
HLA-F-227ENST00000485513 TTC23LQ6PF05 361 aa24.7■■□□□ 1.54
HLA-F-227ENST00000485513 LRRC6Q86X45 466 aa24.7■■□□□ 1.54
HLA-F-227ENST00000485513 MAIP1Q8WWC4 291 aa24.7■■□□□ 1.54
HLA-F-227ENST00000485513 SHANK1Q9Y566 2161 aa24.7■■□□□ 1.54
HLA-F-227ENST00000485513 KPNA5O15131 536 aa24.69■■□□□ 1.54
HLA-F-227ENST00000485513 CNOT3O75175 753 aaKnown RBP24.69■■□□□ 1.54
HLA-F-227ENST00000485513 IGHEP01854 428 aa24.69■■□□□ 1.54
HLA-F-227ENST00000485513 ALAS2P22557 587 aa24.69■■□□□ 1.54
HLA-F-227ENST00000485513 GNLYP22749 145 aa24.69■■□□□ 1.54
HLA-F-227ENST00000485513 NMBRP28336 390 aa24.69■■□□□ 1.54
HLA-F-227ENST00000485513 SF1Q15637 639 aaKnown RBP24.69■■□□□ 1.54
HLA-F-227ENST00000485513 VWA5B1Q5TIE3 1220 aa24.69■■□□□ 1.54
HLA-F-227ENST00000485513 MRPL14Q6P1L8 145 aaKnown RBP24.69■■□□□ 1.54
HLA-F-227ENST00000485513 RBMXL3Q8N7X1 1067 aaKnown RBP24.69■■□□□ 1.54
HLA-F-227ENST00000485513 CLEC1AQ8NC01 280 aa24.69■■□□□ 1.54
HLA-F-227ENST00000485513 PTERQ96BW5 349 aa24.69■■□□□ 1.54
HLA-F-227ENST00000485513 RAB11FIP5Q9BXF6 653 aa24.69■■□□□ 1.54
HLA-F-227ENST00000485513 SLAMF7Q9NQ25 335 aa24.69■■□□□ 1.54
HLA-F-227ENST00000485513 LZTFL1Q9NQ48 299 aa24.69■■□□□ 1.54
HLA-F-227ENST00000485513 LUZP4Q9P127 313 aa24.69■■□□□ 1.54
HLA-F-227ENST00000485513 FGGP02679 453 aa24.68■■□□□ 1.54
HLA-F-227ENST00000485513 RPS3P23396 243 aaKnown RBP eCLIP24.68■■□□□ 1.54
HLA-F-227ENST00000485513 ARSFP54793 590 aa24.68■■□□□ 1.54
HLA-F-227ENST00000485513 INPP5JQ15735 1006 aaPredicted RBP24.68■■□□□ 1.54
HLA-F-227ENST00000485513 DCAF10Q5QP82 559 aa24.68■■□□□ 1.54
HLA-F-227ENST00000485513 SLC6A19Q695T7 634 aa24.68■■□□□ 1.54
HLA-F-227ENST00000485513 FIGLAQ6QHK4 219 aa24.68■■□□□ 1.54
HLA-F-227ENST00000485513 OTOAQ7RTW8 1153 aa24.68■■□□□ 1.54
HLA-F-227ENST00000485513 OTUD6BQ8N6M0 293 aa24.68■■□□□ 1.54
HLA-F-227ENST00000485513 Q8NA96 180 aa24.68■■□□□ 1.54
HLA-F-227ENST00000485513 DENND1AQ8TEH3 1009 aa24.68■■□□□ 1.54
HLA-F-227ENST00000485513 SKA2Q8WVK7 121 aaPredicted RBP24.68■■□□□ 1.54
HLA-F-227ENST00000485513 RAD51AP1Q96B01 352 aa24.68■■□□□ 1.54
HLA-F-227ENST00000485513 P4HTMQ9NXG6 502 aa24.68■■□□□ 1.54
HLA-F-227ENST00000485513 C5AR2Q9P296 337 aa24.68■■□□□ 1.54
HLA-F-227ENST00000485513 TTC7AQ9ULT0 858 aaPredicted RBP24.68■■□□□ 1.54
HLA-F-227ENST00000485513 GP1BBP13224 206 aa24.67■■□□□ 1.54
HLA-F-227ENST00000485513 MGAT1P26572 445 aa24.67■■□□□ 1.54
HLA-F-227ENST00000485513 GCGRP47871 477 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms