RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 ERGP11308 486 aa17.04■□□□□ 0.32
CHMP3-207ENST00000485465 ATP5F1P24539 256 aaPredicted RBP17.04■□□□□ 0.32
CHMP3-207ENST00000485465 IMPA1P29218 277 aa17.04■□□□□ 0.32
CHMP3-207ENST00000485465 SHMT2P34897 504 aa17.04■□□□□ 0.32
CHMP3-207ENST00000485465 DUSP3P51452 185 aaPredicted RBP17.04■□□□□ 0.32
CHMP3-207ENST00000485465 PNLIPRP1P54315 467 aa17.04■□□□□ 0.32
CHMP3-207ENST00000485465 PPP2R2AP63151 447 aa17.04■□□□□ 0.32
CHMP3-207ENST00000485465 PFKFB4Q16877 469 aa17.04■□□□□ 0.32
CHMP3-207ENST00000485465 ANKS6Q68DC2 871 aa17.04■□□□□ 0.32
CHMP3-207ENST00000485465 AGTRAPQ6RW13 159 aa17.04■□□□□ 0.32
CHMP3-207ENST00000485465 AMIGO1Q86WK6 493 aa17.04■□□□□ 0.32
CHMP3-207ENST00000485465 CNDP2Q96KP4 475 aaKnown RBP17.04■□□□□ 0.32
CHMP3-207ENST00000485465 TBC1D10AQ9BXI6 508 aa17.04■□□□□ 0.32
CHMP3-207ENST00000485465 SRMSQ9H3Y6 488 aa17.04■□□□□ 0.32
CHMP3-207ENST00000485465 EVA1BQ9NVM1 165 aa17.04■□□□□ 0.32
CHMP3-207ENST00000485465 COPG2Q9UBF2 871 aa17.04■□□□□ 0.32
CHMP3-207ENST00000485465 DNAH14Q0VDD8 3507 aa17.04■□□□□ 0.32
CHMP3-207ENST00000485465 CPED1A4D0V7 1026 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 FAM221BA6H8Z2 402 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 A8MT66 165 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 DHRS4L1P0CG22 281 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 PNLIPP16233 465 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 NR1D1P20393 614 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 GGT5P36269 586 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 GPR3P46089 330 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 ALDH18A1P54886 795 aaKnown RBP17.03■□□□□ 0.32
CHMP3-207ENST00000485465 DAB2P98082 770 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 NFKB2Q00653 900 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 FASTKQ14296 549 aaKnown RBP17.03■□□□□ 0.32
CHMP3-207ENST00000485465 NR1D2Q14995 579 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 SETDB1Q15047 1291 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 ZXDCQ2QGD7 858 aaPredicted RBP17.03■□□□□ 0.32
CHMP3-207ENST00000485465 C18orf21Q32NC0 220 aaPredicted RBP17.03■□□□□ 0.32
CHMP3-207ENST00000485465 GUSBP11Q6P575 273 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 SYTL1Q8IYJ3 562 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 PTGR2Q8N8N7 351 aaPredicted RBP17.03■□□□□ 0.32
CHMP3-207ENST00000485465 LMNTD1Q8N9Z9 388 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 OR2L8Q8NGY9 312 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 HMGCLL1Q8TB92 370 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 NAT6Q93015 286 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 CCDC74AQ96AQ1 378 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 PHF21BQ96EK2 531 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 ATG10Q9H0Y0 220 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 WWOXQ9NZC7 414 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 OR6C2Q9NZP2 312 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 FTSJ1Q9UET6 329 aa17.03■□□□□ 0.32
CHMP3-207ENST00000485465 CABIN1Q9Y6J0 2220 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.02■□□□□ 0.32
CHMP3-207ENST00000485465 OR6C74A6NCV1 312 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 E7ENX8 843 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 STX16-NPEPL1H3BU86 382 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 STX16O14662 325 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 GFRA3O60609 400 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 CBFA2T3O75081 653 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 IPO13O94829 963 aaKnown RBP17.02■□□□□ 0.32
CHMP3-207ENST00000485465 CKMT2P17540 419 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 SERPINB4P48594 390 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 LIMK1P53667 647 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 PRKAA2P54646 552 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 EPHA4P54764 986 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 WDR4P57081 412 aaKnown RBP17.02■□□□□ 0.32
CHMP3-207ENST00000485465 TAP2Q03519 686 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 NAE1Q13564 534 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 PCLAFQ15004 111 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 FBXO48Q5FWF7 155 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 HHATQ5VTY9 493 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 EFL1Q7Z2Z2 1120 aaKnown RBP17.02■□□□□ 0.32
CHMP3-207ENST00000485465 SLC22A9Q8IVM8 553 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 C10orf107Q8IVU9 208 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 LRRC56Q8IYG6 542 aaPredicted RBP17.02■□□□□ 0.32
CHMP3-207ENST00000485465 C2orf73Q8N5S3 287 aaPredicted RBP17.02■□□□□ 0.32
CHMP3-207ENST00000485465 LINC01555Q8NAE3 123 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 PPFIBP2Q8ND30 876 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 OR56A3Q8NH54 315 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 BAHD1Q8TBE0 780 aaPredicted RBP17.02■□□□□ 0.32
CHMP3-207ENST00000485465 MDM1Q8TC05 714 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 MGARPQ8TDB4 240 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 UBTD2Q8WUN7 234 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 CCDC126Q96EE4 140 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 TMEM79Q9BSE2 394 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 MLXIPLQ9NP71 852 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 OXSMQ9NWU1 459 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 KCNK4Q9NYG8 393 aa17.02■□□□□ 0.32
CHMP3-207ENST00000485465 BTN3A3O00478 584 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 UBXN7O94888 489 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 BPGMP07738 259 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 ALDH4A1P30038 563 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 ALDH3A1P30838 453 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 SLC6A12P48065 614 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 HSPA7P48741 367 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 AGTR2P50052 363 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 OR1D5P58170 312 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 PTCHD3Q3KNS1 767 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 PERM1Q5SV97 790 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 RAB44Q7Z6P3 723 aaPredicted RBP17.01■□□□□ 0.31
CHMP3-207ENST00000485465 PIP4P1Q86T03 277 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 KLHDC8AQ8IYD2 350 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 ADGRF3Q8IZF5 1079 aa17.01■□□□□ 0.31
CHMP3-207ENST00000485465 Q8N9G6 341 aaPredicted RBP17.01■□□□□ 0.31
CHMP3-207ENST00000485465 IFI44Q8TCB0 444 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms