RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ANKRD20A12PQ8NF67 263 aa4.29□□□□□ -1.72
VPS13A-211ENST00000484581 LILRB1Q8NHL6 650 aaPredicted RBP4.29□□□□□ -1.72
VPS13A-211ENST00000484581 UBLCP1Q8WVY7 318 aaPredicted RBP4.29□□□□□ -1.72
VPS13A-211ENST00000484581 WASF1Q92558 559 aa4.29□□□□□ -1.72
VPS13A-211ENST00000484581 SEMA4DQ92854 862 aa4.29□□□□□ -1.72
VPS13A-211ENST00000484581 DAZLQ92904 295 aaKnown RBP4.29□□□□□ -1.72
VPS13A-211ENST00000484581 SLC25A33Q9BSK2 321 aa4.29□□□□□ -1.72
VPS13A-211ENST00000484581 SPRTNQ9H040 489 aaPredicted RBP4.29□□□□□ -1.72
VPS13A-211ENST00000484581 LRMDAQ9H2I8 198 aa4.29□□□□□ -1.72
VPS13A-211ENST00000484581 TRNAU1APQ9NX07 287 aaKnown RBP4.29□□□□□ -1.72
VPS13A-211ENST00000484581 FETUBQ9UGM5 382 aa4.29□□□□□ -1.72
VPS13A-211ENST00000484581 PIN4Q9Y237 131 aaKnown RBP4.29□□□□□ -1.72
VPS13A-211ENST00000484581 TEX264Q9Y6I9 313 aa4.29□□□□□ -1.72
VPS13A-211ENST00000484581 CPLX1O14810 134 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 CTDSPLO15194 276 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 NME6O75414 186 aaPredicted RBP4.28□□□□□ -1.72
VPS13A-211ENST00000484581 CRCPO75575 148 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 SERPINI2O75830 405 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 BMP10O95393 424 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 FGBP02675 491 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 ALPPP05187 535 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 ALPPL2P10696 532 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 POLR2CP19387 275 aaPredicted RBP4.28□□□□□ -1.72
VPS13A-211ENST00000484581 NR4A2P43354 598 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 CDX1P47902 265 aaPredicted RBP4.28□□□□□ -1.72
VPS13A-211ENST00000484581 MMP15P51511 669 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 FOXG1P55316 489 aaPredicted RBP4.28□□□□□ -1.72
VPS13A-211ENST00000484581 CLDN15P56746 228 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 EGR4Q05215 589 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 RABEP1Q15276 862 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 PTGISQ16647 500 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 PRTGQ2VWP7 1150 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 ZNF260Q3ZCT1 412 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 IFI44LQ53G44 452 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 LACTB2Q53H82 288 aaPredicted RBP4.28□□□□□ -1.72
VPS13A-211ENST00000484581 PRAMEF8Q5VWM4 474 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 C11orf63Q6NUN7 778 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 COMMD2Q86X83 199 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 C1orf87Q8N0U7 546 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 LRRC8CQ8TDW0 803 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 TMEM255BQ8WV15 326 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 CCDC107Q8WV48 283 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 PROX1Q92786 737 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 PHF21AQ96BD5 680 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 SGF29Q96ES7 293 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 PANX3Q96QZ0 392 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 RAD9AQ99638 391 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 ATG101Q9BSB4 218 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 GKN1Q9NS71 199 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 P4HTMQ9NXG6 502 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 NINJ2Q9NZG7 142 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 TXNDC16Q9P2K2 825 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 ITM2BQ9Y287 266 aa4.28□□□□□ -1.72
VPS13A-211ENST00000484581 RPH3AQ9Y2J0 694 aaPredicted RBP4.28□□□□□ -1.72
VPS13A-211ENST00000484581 TDRKHQ9Y2W6 561 aaKnown RBP4.28□□□□□ -1.72
VPS13A-211ENST00000484581 TRAV24A0A0B4J272 114 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 ILVBLA1L0T0 632 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 MAGEA13PA6NCF6 341 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 MYMKA6NI61 221 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 PRR32B1ATL7 298 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 INAFM1C9JVW0 142 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 INSIG1O15503 277 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 RAD51DO75771 328 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 ATP6AP2O75787 350 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 LETM1O95202 739 aaPredicted RBP4.27□□□□□ -1.73
VPS13A-211ENST00000484581 GSRP00390 522 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 H1F0P07305 194 aaKnown RBP4.27□□□□□ -1.73
VPS13A-211ENST00000484581 ABHD2P08910 425 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 SSTR2P30874 369 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 HOXD3P31249 432 aaPredicted RBP4.27□□□□□ -1.73
VPS13A-211ENST00000484581 SERPINB6P35237 376 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 PSMC4P43686 418 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 RPL21P46778 160 aaKnown RBP4.27□□□□□ -1.73
VPS13A-211ENST00000484581 NPBWR1P48145 328 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 GPC3P51654 580 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 ZNF131P52739 623 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 ARHGAP1Q07960 439 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 DHX34Q14147 1143 aaKnown RBP4.27□□□□□ -1.73
VPS13A-211ENST00000484581 CTU2Q2VPK5 515 aaKnown RBP4.27□□□□□ -1.73
VPS13A-211ENST00000484581 TMEM35AQ53FP2 167 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 KLHL22Q53GT1 634 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 ELFN2Q5R3F8 820 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 C8orf82Q6P1X6 216 aaPredicted RBP4.27□□□□□ -1.73
VPS13A-211ENST00000484581 PLEKHM3Q6ZWE6 761 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 MIER3Q7Z3K6 550 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 ARHGAP22Q7Z5H3 698 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 NLRP14Q86W24 1093 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 ARHGAP24Q8N264 748 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 GBGT1Q8N5D6 347 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 CPSF7Q8N684 471 aaKnown RBP4.27□□□□□ -1.73
VPS13A-211ENST00000484581 BMPERQ8N8U9 685 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 RASGEF1AQ8N9B8 481 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 ZNF548Q8NEK5 533 aaPredicted RBP4.27□□□□□ -1.73
VPS13A-211ENST00000484581 CKAP2Q8WWK9 683 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 P2RX5Q93086 422 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 AP2M1Q96CW1 435 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 DCLK3Q9C098 648 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 P2RY12Q9H244 342 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 HSD3B7Q9H2F3 369 aa4.27□□□□□ -1.73
VPS13A-211ENST00000484581 ACKR4Q9NPB9 350 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms