RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 PLEKHS1Q5SXH7 462 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 DUPD1Q68J44 220 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 ZNF787Q6DD87 383 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 ZNF470Q6ECI4 717 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 UNC5DQ6UXZ4 953 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 PRSS42Q7Z5A4 293 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 OOSP2Q86WS3 158 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 CNTN4Q8IWV2 1026 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 TBC1D21Q8IYX1 336 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 SLC22A15Q8IZD6 547 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 SIDT2Q8NBJ9 832 aaKnown RBP9.69□□□□□ -0.86
CPSF4-213ENST00000484112 GSDMBQ8TAX9 411 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 THAP4Q8WY91 577 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 KLHL6Q8WZ60 621 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 TFGQ92734 400 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-213ENST00000484112 RMDN2Q96LZ7 410 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 BIRC8Q96P09 236 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 TRIM51Q9BSJ1 452 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 ING2Q9H160 280 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 C20orf96Q9NUD7 363 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-213ENST00000484112 SEMA5BQ9P283 1151 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 SLC24A2Q9UI40 661 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 CORO1CQ9ULV4 474 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-213ENST00000484112 PSMD13Q9UNM6 376 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 ICE1Q9Y2F5 2266 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 TEX264Q9Y6I9 313 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 PRSS21Q9Y6M0 314 aa9.69□□□□□ -0.86
CPSF4-213ENST00000484112 TNRC6AQ8NDV7 1962 aaKnown RBP9.68□□□□□ -0.86
CPSF4-213ENST00000484112 IGHV5-51A0A0C4DH38 117 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 TCP11X1B4DZS4 312 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 EIF3FO00303 357 aaPredicted RBP9.68□□□□□ -0.86
CPSF4-213ENST00000484112 TP73O15350 636 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 RAD51CO43502 376 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 RECKO95980 971 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 EBLN1P0CF75 366 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 PKMP14618 531 aaKnown RBP9.68□□□□□ -0.86
CPSF4-213ENST00000484112 NELFEP18615 380 aaKnown RBP9.68□□□□□ -0.86
CPSF4-213ENST00000484112 CD9P21926 228 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 ACADLP28330 430 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 PTPN4P29074 926 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 CCR7P32248 378 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 RPL21P46778 160 aaKnown RBP9.68□□□□□ -0.86
CPSF4-213ENST00000484112 EIF3BP55884 814 aaKnown RBP9.68□□□□□ -0.86
CPSF4-213ENST00000484112 C2orf54Q08AI8 447 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 PRKAA1Q13131 559 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 PLCL1Q15111 1095 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 TTLL9Q3SXZ7 439 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 BBS9Q3SYG4 887 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 GLE1Q53GS7 698 aaKnown RBP9.68□□□□□ -0.86
CPSF4-213ENST00000484112 STEAP4Q687X5 459 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 CES3Q6UWW8 571 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 CEP128Q6ZU80 1094 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 CYS1Q717R9 158 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 CENPUQ71F23 418 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 OTOAQ7RTW8 1153 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 KCNMB4Q86W47 210 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 KMT5CQ86Y97 462 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 AGGF1Q8N302 714 aaeCLIP9.68□□□□□ -0.86
CPSF4-213ENST00000484112 PHC3Q8NDX5 983 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 OR5K2Q8NHB8 316 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 MAGEC3Q8TD91 643 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 SEC14L1Q92503 715 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 UBXN4Q92575 508 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 KCNJ9Q92806 393 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 MR1Q95460 341 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 GPR87Q9BY21 358 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 CCDC68Q9H2F9 335 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 SLAMF7Q9NQ25 335 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 CUEDC1Q9NWM3 386 aaPredicted RBP9.68□□□□□ -0.86
CPSF4-213ENST00000484112 NSMCE4AQ9NXX6 385 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 ZC3H7BQ9UGR2 993 aaKnown RBP9.68□□□□□ -0.86
CPSF4-213ENST00000484112 FARSAQ9Y285 508 aaKnown RBP9.68□□□□□ -0.86
CPSF4-213ENST00000484112 SNX24Q9Y343 169 aa9.68□□□□□ -0.86
CPSF4-213ENST00000484112 OR5K3A6NET4 321 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 A6NL46 340 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 ESPNB1AK53 854 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 BHMG1C9JSJ3 638 aaPredicted RBP9.67□□□□□ -0.86
CPSF4-213ENST00000484112 SORBS2O94875 1100 aaKnown RBP9.67□□□□□ -0.86
CPSF4-213ENST00000484112 S1PR4O95977 384 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 GSTA2P09210 222 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 PDHA2P29803 388 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 SHMT2P34897 504 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 CCNFP41002 786 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 ELK3P41970 407 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 SKIV2L2P42285 1042 aaKnown RBP9.67□□□□□ -0.86
CPSF4-213ENST00000484112 ACY1Q03154 408 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 HSPA14Q0VDF9 509 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 IL10RAQ13651 578 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 MSS51Q4VC12 460 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 HSP90AA5PQ58FG0 334 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 LRRC8EQ6NSJ5 796 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 UGT3A1Q6NUS8 523 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 ARMC6Q6NXE6 501 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 C8orf74Q6P047 294 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 TTC23LQ6PF05 361 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 NEK10Q6ZWH5 1172 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 SYVN1Q86TM6 617 aa9.67□□□□□ -0.86
CPSF4-213ENST00000484112 LDB1Q86U70 411 aaPredicted RBP9.67□□□□□ -0.86
CPSF4-213ENST00000484112 BPHLQ86WA6 291 aaPredicted RBP9.67□□□□□ -0.86
CPSF4-213ENST00000484112 MMGT1Q8N4V1 131 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms