RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 DUS3LQ96G46 650 aaKnown RBP12.88□□□□□ -0.35
CPNE1-225ENST00000483495 RSRC1Q96IZ7 334 aaKnown RBP12.88□□□□□ -0.35
CPNE1-225ENST00000483495 PKP4Q99569 1192 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 ZNF184Q99676 751 aaPredicted RBP12.88□□□□□ -0.35
CPNE1-225ENST00000483495 PCDHAC1Q9H158 963 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 DPEP2Q9H4A9 486 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 ELOVL6Q9H5J4 265 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 INTS7Q9NVH2 962 aaKnown RBP12.88□□□□□ -0.35
CPNE1-225ENST00000483495 CMTM6Q9NX76 183 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 PRSS51A0A1B0GVH4 220 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 MGAT4DA6NG13 374 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 ACPPP15309 386 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 VARSP26640 1264 aaKnown RBP12.87□□□□□ -0.35
CPNE1-225ENST00000483495 TEAD1P28347 426 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 BDKRB1P46663 353 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 CHIT1Q13231 466 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 E2F2Q14209 437 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 SGO1Q5FBB7 561 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 CACHD1Q5VU97 1274 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 C11orf96Q7Z7L8 435 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 CFAP206Q8IYR0 622 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 PQLC1Q8N2U9 271 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 GLB1L3Q8NCI6 653 aaPredicted RBP12.87□□□□□ -0.35
CPNE1-225ENST00000483495 HM13Q8TCT9 377 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 FOXJ1Q92949 421 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 TMEM125Q96AQ2 219 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 FAM131CQ96AQ9 280 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 IL1RL2Q9HB29 575 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 LMCD1Q9NZU5 365 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 TCRBV3S1A0A5B6 114 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 IGLON5A6NGN9 336 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 ANHXE9PGG2 379 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 SEC22BO75396 215 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 POP7O75817 140 aaKnown RBP12.87□□□□□ -0.35
CPNE1-225ENST00000483495 SLC16A8O95907 504 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 RPSAP08865 295 aaKnown RBP12.87□□□□□ -0.35
CPNE1-225ENST00000483495 CASP2P42575 452 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 WASP42768 502 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 RHDQ02161 417 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 BNIP2Q12982 314 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 NAE1Q13564 534 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 HTR4Q13639 388 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 CAPRIN1Q14444 709 aaKnown RBP12.87□□□□□ -0.35
CPNE1-225ENST00000483495 WSCD2Q2TBF2 565 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 MAP7D1Q3KQU3 841 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 USP39Q53GS9 565 aaKnown RBP12.87□□□□□ -0.35
CPNE1-225ENST00000483495 IRAK1BP1Q5VVH5 260 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 FRG2Q64ET8 278 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 ZUFSPQ96AP4 578 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 ERLEC1Q96DZ1 483 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 MSLNLQ96KJ4 702 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 FRG2BQ96QU4 278 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 OR4K3Q96R72 315 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 VCX3BQ9H321 246 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 TMED5Q9Y3A6 229 aa12.87□□□□□ -0.35
CPNE1-225ENST00000483495 CKAP5Q14008 2032 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 CEP290O15078 2479 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 C15orf38-AP3S2A0A0A6YYH1 394 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 PEX1O43933 1283 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 CD22P20273 847 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 ACADLP28330 430 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 LTBRP36941 435 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 HALP42357 657 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 YBX1P67809 324 aaKnown RBP12.86□□□□□ -0.35
CPNE1-225ENST00000483495 CDK3Q00526 305 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 IRF8Q02556 426 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 PTGR1Q14914 329 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 SLC44A4Q53GD3 710 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 ZNF776Q68DI1 518 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-225ENST00000483495 SUSD1Q6UWL2 747 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 DLEU7Q6UYE1 221 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.86□□□□□ -0.35
CPNE1-225ENST00000483495 ARPINQ7Z6K5 226 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 SPATA24Q86W54 205 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 KIAA2013Q8IYS2 634 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 LIX1Q8N485 282 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 WDR20Q8TBZ3 569 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 MTFMTQ96DP5 389 aaKnown RBP12.86□□□□□ -0.35
CPNE1-225ENST00000483495 CMTM7Q96FZ5 175 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 ZBTB18Q99592 522 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 GABRG3Q99928 467 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 CLMPQ9H6B4 373 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 GPRC5BQ9NZH0 403 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 SERGEFQ9UGK8 458 aa12.86□□□□□ -0.35
CPNE1-225ENST00000483495 REV3LO60673 3130 aa12.85□□□□□ -0.35
CPNE1-225ENST00000483495 C5orf42Q9H799 3197 aa12.85□□□□□ -0.35
CPNE1-225ENST00000483495 H0YIV9 168 aa12.85□□□□□ -0.35
CPNE1-225ENST00000483495 CAPNS1P04632 268 aa12.85□□□□□ -0.35
CPNE1-225ENST00000483495 PRPS2P11908 318 aa12.85□□□□□ -0.35
CPNE1-225ENST00000483495 BCKDHAP12694 445 aa12.85□□□□□ -0.35
CPNE1-225ENST00000483495 BMP8BP34820 402 aa12.85□□□□□ -0.35
CPNE1-225ENST00000483495 HNF4AP41235 474 aa12.85□□□□□ -0.35
CPNE1-225ENST00000483495 NEK2P51955 445 aa12.85□□□□□ -0.35
CPNE1-225ENST00000483495 EEFSECP57772 596 aaKnown RBP12.85□□□□□ -0.35
CPNE1-225ENST00000483495 RPS14P62263 151 aaKnown RBP12.85□□□□□ -0.35
CPNE1-225ENST00000483495 CSTF3Q12996 717 aaKnown RBP12.85□□□□□ -0.35
CPNE1-225ENST00000483495 RPA4Q13156 261 aa12.85□□□□□ -0.35
CPNE1-225ENST00000483495 COL19A1Q14993 1142 aa12.85□□□□□ -0.35
CPNE1-225ENST00000483495 OGFRL1Q5TC84 451 aaPredicted RBP12.85□□□□□ -0.35
CPNE1-225ENST00000483495 GRHL2Q6ISB3 625 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms