RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 COL27A1Q8IZC6 1860 aaPredicted RBP17.27■□□□□ 0.36
CPNE1-224ENST00000483359 FAM149AA5PLN7 773 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 CHRM5P08912 532 aaPredicted RBP17.27■□□□□ 0.36
CPNE1-224ENST00000483359 IMPA1P29218 277 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 SLC26A3P40879 764 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 PDX1P52945 283 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 RASA2Q15283 850 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 SUSD1Q6UWL2 747 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 CCDC91Q7Z6B0 441 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 ISCA2Q86U28 154 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 MARCH9Q86YJ5 346 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 C4orf33Q8N1A6 199 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 FBXO15Q8NCQ5 510 aaPredicted RBP17.27■□□□□ 0.36
CPNE1-224ENST00000483359 RCBTB1Q8NDN9 531 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 ZNF480Q8WV37 535 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 PPM1MQ96MI6 270 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 TSNARE1Q96NA8 513 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 EGFL8Q99944 293 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 TRIM54Q9BYV2 358 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 SEMA6CQ9H3T2 930 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 OR6C2Q9NZP2 312 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 LNPEPQ9UIQ6 1025 aa17.27■□□□□ 0.36
CPNE1-224ENST00000483359 PIPSLA2A3N6 862 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 A8MU76 341 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 KLC3Q6P597 504 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 ZNF574Q6ZN55 896 aaPredicted RBP17.26■□□□□ 0.35
CPNE1-224ENST00000483359 RBM44Q6ZP01 1051 aaKnown RBP17.26■□□□□ 0.35
CPNE1-224ENST00000483359 CHCHD4Q8N4Q1 142 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 ANKRD7Q92527 254 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 KIAA1191Q96A73 305 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 ALKBH8Q96BT7 664 aaKnown RBP17.26■□□□□ 0.35
CPNE1-224ENST00000483359 CABS1Q96KC9 395 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 RAB11FIP5Q9BXF6 653 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 ATG10Q9H0Y0 220 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 EPB41L1Q9H4G0 881 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 SPATA7Q9P0W8 599 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 STOX2Q9P2F5 926 aaPredicted RBP17.26■□□□□ 0.35
CPNE1-224ENST00000483359 LGALS13Q9UHV8 139 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 OARD1Q9Y530 152 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 FAM221BA6H8Z2 402 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 ISM1B1AKI9 464 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 KIF1CO43896 1103 aaKnown RBP17.26■□□□□ 0.35
CPNE1-224ENST00000483359 RASSF9O75901 435 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 ENO2P09104 434 aaPredicted RBP17.26■□□□□ 0.35
CPNE1-224ENST00000483359 KRT4P19013 534 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 PSMB5P28074 263 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 PEBP1P30086 187 aaKnown RBP17.26■□□□□ 0.35
CPNE1-224ENST00000483359 KCNC1P48547 511 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 PNLIPRP1P54315 467 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 TGFBIQ15582 683 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 FBXO48Q5FWF7 155 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 PHF19Q5T6S3 580 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 ANKS6Q68DC2 871 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 CLEC14AQ86T13 490 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 PLXDC1Q8IUK5 500 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 FAM20CQ8IXL6 584 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 SRRM1Q8IYB3 904 aaKnown RBP17.26■□□□□ 0.35
CPNE1-224ENST00000483359 OR2L8Q8NGY9 312 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 WDR48Q8TAF3 677 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 MED8Q96G25 268 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 SCYL1Q96KG9 808 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 CCDC138Q96M89 665 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 GPR78Q96P69 363 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 RUFY1Q96T51 708 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 TMEM109Q9BVC6 243 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 ACAT2Q9BWD1 397 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 ACTR10Q9NZ32 417 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 CLCA2Q9UQC9 943 aa17.26■□□□□ 0.35
CPNE1-224ENST00000483359 WDFY3Q8IZQ1 3526 aa17.25■□□□□ 0.35
CPNE1-224ENST00000483359 SPTBN2O15020 2390 aa17.25■□□□□ 0.35
CPNE1-224ENST00000483359 MT-CO3P00414 261 aa17.25■□□□□ 0.35
CPNE1-224ENST00000483359 KPNA2P52292 529 aaKnown RBP17.25■□□□□ 0.35
CPNE1-224ENST00000483359 FOXC1Q12948 553 aa17.25■□□□□ 0.35
CPNE1-224ENST00000483359 N4BP2L1Q5TBK1 243 aaPredicted RBP17.25■□□□□ 0.35
CPNE1-224ENST00000483359 TMEM71Q6P5X7 295 aa17.25■□□□□ 0.35
CPNE1-224ENST00000483359 WDR74Q6RFH5 385 aaPredicted RBP17.25■□□□□ 0.35
CPNE1-224ENST00000483359 DGLUCYQ7Z3D6 616 aa17.25■□□□□ 0.35
CPNE1-224ENST00000483359 TRIM73Q86UV7 250 aa17.25■□□□□ 0.35
CPNE1-224ENST00000483359 GPSM1Q86YR5 675 aa17.25■□□□□ 0.35
CPNE1-224ENST00000483359 STAG3L4Q8TBR4 150 aa17.25■□□□□ 0.35
CPNE1-224ENST00000483359 ADAMTS14Q8WXS8 1223 aa17.25■□□□□ 0.35
CPNE1-224ENST00000483359 CCDC74BQ96LY2 380 aa17.25■□□□□ 0.35
CPNE1-224ENST00000483359 KLHL25Q9H0H3 589 aa17.25■□□□□ 0.35
CPNE1-224ENST00000483359 XPR1Q9UBH6 696 aa17.25■□□□□ 0.35
CPNE1-224ENST00000483359 NOVA2Q9UNW9 492 aaKnown RBP17.25■□□□□ 0.35
CPNE1-224ENST00000483359 MN1Q10571 1320 aaPredicted RBP17.24■□□□□ 0.35
CPNE1-224ENST00000483359 IGHV5-10-1A0A0J9YXX1 117 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 C2orf74A8MZ97 194 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 SUPT3HB4E1H0 165 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 UBXN8O00124 270 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 RGS16O15492 202 aaPredicted RBP17.24■□□□□ 0.35
CPNE1-224ENST00000483359 SUPT3HO75486 399 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 CDK4P11802 303 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 AP1S2P56377 157 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 ACAP2Q15057 778 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 C18orf21Q32NC0 220 aaPredicted RBP17.24■□□□□ 0.35
CPNE1-224ENST00000483359 AGTRAPQ6RW13 159 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 LRIG3Q6UXM1 1119 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 OR4D9Q8NGE8 314 aa17.24■□□□□ 0.35
CPNE1-224ENST00000483359 ACMSDQ8TDX5 336 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms