RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 TUBE1Q9UJT0 475 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 RRP15Q9Y3B9 282 aaKnown RBP2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 MAU2Q9Y6X3 613 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 ATAD2BQ9ULI0 1458 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 RNF103-CHMP3A0A140T963 221 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 A0A1W2PQF6 199 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 A8MV72 311 aaPredicted RBP2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 A8MZ25 164 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 RNF103O00237 685 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 ZNF263O14978 683 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 ATP2A1O14983 1001 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 PRPSAP2O60256 369 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 JRKO75564 520 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 RECQL5O94762 991 aaPredicted RBP2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 SIX3O95343 332 aaPredicted RBP2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 NADKO95544 446 aaPredicted RBP2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 NGFP01138 241 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 TPOP07202 933 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 PLA2G4BP0C869 781 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 ERCC2P18074 760 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 ANXA7P20073 488 aaKnown RBP2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 CASTP20810 708 aaKnown RBP2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 PRPHP41219 470 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 SLC15A1P46059 708 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 NRIP1P48552 1158 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 F2RL1P55085 397 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 CD81P60033 236 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 ACTN3Q08043 901 aaPredicted RBP2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 TEFQ10587 303 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 CBX3Q13185 183 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 ALCAMQ13740 583 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 SNTB1Q13884 538 aaKnown RBP2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 IRF3Q14653 427 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 LASP1Q14847 261 aaKnown RBP2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 PCLAFQ15004 111 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 PPA1Q15181 289 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 ZSCAN23Q3MJ62 389 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 ANKDD1AQ495B1 522 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 RAB6CQ53S08 254 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 GLRA4Q5JXX5 417 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 GKAP1Q5VSY0 366 aaPredicted RBP2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 PM20D2Q8IYS1 436 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 RNF168Q8IYW5 571 aaPredicted RBP2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 RASGEF1CQ8N431 466 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 HDDC3Q8N4P3 179 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 OTUD6BQ8N6M0 293 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 MCUQ8NE86 351 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 HM13Q8TCT9 377 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 SGCDQ92629 289 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 KRT35Q92764 455 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 ZKSCAN4Q969J2 545 aaPredicted RBP2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 MOCOSQ96EN8 888 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 C18orf12Q96KH6 178 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 AK8Q96MA6 479 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 RUNDC3BQ96NL0 473 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 FERMT1Q9BQL6 677 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 RHNO1Q9BSD3 238 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 SLC25A23Q9BV35 468 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 MLPHQ9BV36 600 aaPredicted RBP2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 KLHL4Q9C0H6 718 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 RAB6CQ9H0N0 254 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 NT5C3AQ9H0P0 336 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 MMADHCQ9H3L0 296 aaPredicted RBP2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 THAP9Q9H5L6 903 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 ATAD3AQ9NVI7 634 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 KLHL8Q9P2G9 620 aaPredicted RBP2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 EXTL2Q9UBQ6 330 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 OSGIN1Q9UJX0 560 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 ANAPC2Q9UJX6 822 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 TRPV2Q9Y5S1 764 aa2.75□□□□□ -1.97
LAPTM4A-202ENST00000483117 TRAV34A0A0B4J273 112 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 TRBC2A0A5B9 178 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 KRT87PA6NCN2 255 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 E9PQ18 207 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 CTDSP2O14595 271 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 KINO60870 393 aaKnown RBP2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 RTN2O75298 545 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 NDUFS3O75489 264 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 SLC25A12O75746 678 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 DDHD2O94830 711 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 OR2C1O95371 312 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 BMP10O95393 424 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 CLPTM1O96005 669 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 SLC4A1P02730 911 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 ICAM1P05362 532 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 RB1P06400 928 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 PCP11498 1178 aaKnown RBP2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 KRT13P13646 458 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 LIFP15018 202 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 TMEM11P17152 192 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 CPT2P23786 658 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 ITGA3P26006 1051 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 EPHA2P29317 976 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 TLX1P31314 330 aaPredicted RBP2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 CASP3P42574 277 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 PSMC4P43686 418 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 TDO2P48775 406 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 NT5C2P49902 561 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 GPC3P51654 580 aa2.74□□□□□ -1.97
LAPTM4A-202ENST00000483117 BMXP51813 675 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms