RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 EPHX4Q8IUS5 362 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 CEP97Q8IW35 865 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 TMEM151BQ8IW70 566 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 FBXW8Q8N3Y1 598 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 AVL9Q8NBF6 648 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 RCBTB1Q8NDN9 531 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 CATSPER1Q8NEC5 780 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 STAG3L4Q8TBR4 150 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 DLG3Q92796 817 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 TOP1MTQ969P6 601 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.59□□□□□ -1.19
SNX13-208ENST00000482558 ZNF419Q96HQ0 510 aaPredicted RBP7.59□□□□□ -1.19
SNX13-208ENST00000482558 MAP6Q96JE9 813 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 CYP2S1Q96SQ9 504 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 HERC2P3Q9BVR0 1158 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 VCXQ9H320 206 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 HIPK3Q9H422 1215 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 POMKQ9H5K3 350 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 MEAF6Q9HAF1 191 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 TRPV4Q9HBA0 871 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 SERHLQ9NQF3 203 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 SPATS2LQ9NUQ6 558 aaKnown RBP7.59□□□□□ -1.19
SNX13-208ENST00000482558 TMEM160Q9NX00 188 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 DCAF16Q9NXF7 216 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 TAS2R13Q9NYV9 303 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 SLC2A6Q9UGQ3 507 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 SLC7A8Q9UHI5 535 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 SNX8Q9Y5X2 465 aa7.59□□□□□ -1.19
SNX13-208ENST00000482558 NYNRINQ9P2P1 1898 aaKnown RBP7.59□□□□□ -1.19
SNX13-208ENST00000482558 VWA8A3KMH1 1905 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 GREB1Q4ZG55 1949 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 MIA3Q5JRA6 1907 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.58□□□□□ -1.2
SNX13-208ENST00000482558 AQP12BA6NM10 295 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 GRID2O43424 1007 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 GPC4O75487 556 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 VNN2O95498 520 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 SCGB1D1O95968 90 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 HMBSP08397 361 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 CLTBP09497 229 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 THEGLP0DJG4 465 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 LAG3P18627 525 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 ATF6P18850 670 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 CR2P20023 1033 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 PIK3R1P27986 724 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 HOXD9P28356 352 aaPredicted RBP7.58□□□□□ -1.2
SNX13-208ENST00000482558 OR1D2P34982 312 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 AVPR1AP37288 418 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 GLRBP48167 497 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 CSNK1DP48730 415 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 ACADVLP49748 655 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 STC1P52823 247 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 EPHB3P54753 998 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 MTTPP55157 894 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 AP1S1P61966 158 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 HERVK_113P63132 956 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 RAD51Q06609 339 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 GRIK2Q13002 908 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 ART3Q13508 389 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 CSHL1Q14406 222 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 GPNMBQ14956 572 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 LSM12Q3MHD2 195 aaKnown RBP7.58□□□□□ -1.2
SNX13-208ENST00000482558 SLC9B1Q4ZJI4 515 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 ZNF385BQ569K4 471 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 FAM182AQ5T1J6 154 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 MPP7Q5T2T1 576 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 LYPLAL1Q5VWZ2 237 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 LIN54Q6MZP7 749 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 IRGCQ6NXR0 463 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 RFWD3Q6PCD5 774 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 CNSTQ6PJW8 725 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 ABRAXAS1Q6UWZ7 409 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 HACD2Q6Y1H2 254 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 CERS6Q6ZMG9 384 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 ESPNLQ6ZVH7 1005 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 PTAR1Q7Z6K3 402 aaPredicted RBP7.58□□□□□ -1.2
SNX13-208ENST00000482558 SAMD14Q8IZD0 417 aaPredicted RBP7.58□□□□□ -1.2
SNX13-208ENST00000482558 CLYBLQ8N0X4 340 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 PGAM4Q8N0Y7 254 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 PGBD5Q8N414 524 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 CCNYL1Q8N7R7 359 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 ZNF557Q8N988 423 aaPredicted RBP7.58□□□□□ -1.2
SNX13-208ENST00000482558 KDM1BQ8NB78 822 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 HJURPQ8NCD3 748 aaPredicted RBP7.58□□□□□ -1.2
SNX13-208ENST00000482558 PIP4K2CQ8TBX8 421 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 BLOC1S5Q8TDH9 187 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 PRR11Q96HE9 360 aaPredicted RBP7.58□□□□□ -1.2
SNX13-208ENST00000482558 CDKN2AIPNLQ96HQ2 116 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 ZNF558Q96NG5 402 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 KLHL5Q96PQ7 755 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 NR1H4Q96RI1 486 aaPredicted RBP7.58□□□□□ -1.2
SNX13-208ENST00000482558 TRIB3Q96RU7 358 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 ERVK-6Q9BXR3 956 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 MRPL1Q9BYD6 325 aaKnown RBP7.58□□□□□ -1.2
SNX13-208ENST00000482558 DERL2Q9GZP9 239 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 ZNF385DQ9H6B1 395 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 ZBTB26Q9HCK0 441 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 NKX1-2Q9UD57 310 aaPredicted RBP7.58□□□□□ -1.2
SNX13-208ENST00000482558 ZDHHC2Q9UIJ5 367 aa7.58□□□□□ -1.2
SNX13-208ENST00000482558 CDH22Q9UJ99 828 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms