RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 OR1E2P47887 323 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 RAB15P59190 212 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 GRSF1Q12849 480 aaKnown RBP eCLIP12.42□□□□□ -0.42
VPS52-218ENST00000482399 OXA1LQ15070 435 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 PCBP1Q15365 356 aaKnown RBP eCLIP12.42□□□□□ -0.424e-9■■■□□ 16.2
VPS52-218ENST00000482399 TIGD6Q17RP2 521 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 PARP15Q460N3 678 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 OR2T5Q6IEZ7 315 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 B3GNT8Q7Z7M8 397 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 FAM83FQ8NEG4 500 aaPredicted RBP12.42□□□□□ -0.42
VPS52-218ENST00000482399 OR2T29Q8NH02 315 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 GTF2H4Q92759 462 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 GTPBP3Q969Y2 492 aaKnown RBP12.42□□□□□ -0.42
VPS52-218ENST00000482399 MED8Q96G25 268 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 PYURFQ96I23 114 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 SLC6A13Q9NSD5 602 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.42□□□□□ -0.42
VPS52-218ENST00000482399 ARIH1Q9Y4X5 557 aaPredicted RBP12.42□□□□□ -0.42
VPS52-218ENST00000482399 KNL1Q8NG31 2342 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 FAM92AA1XBS5 289 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 IQCA1LA6NCM1 817 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 MTX2O75431 263 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 WDR47O94967 919 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 CRATP43155 626 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 TAF1CQ15572 869 aaPredicted RBP12.42□□□□□ -0.42
VPS52-218ENST00000482399 ATAD3BQ5T9A4 648 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 GDF6Q6KF10 455 aaPredicted RBP12.42□□□□□ -0.42
VPS52-218ENST00000482399 TRAF7Q6Q0C0 670 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.42□□□□□ -0.42
VPS52-218ENST00000482399 BRI3BPQ8WY22 251 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 ZNF382Q96SR6 550 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 TMEM248Q9NWD8 314 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 ERVK13-1Q9NX77 482 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 SLCO3A1Q9UIG8 710 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 BOLA1Q9Y3E2 137 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 LTBP3Q9NS15 1303 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 ANKRD66B4E2M5 251 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 LOC110117498-PIK3R3F6TDL0 507 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 IFRD1O00458 451 aaPredicted RBP12.42□□□□□ -0.42
VPS52-218ENST00000482399 MGEA5O60502 916 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 EPN2O95208 641 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 BCKDHAP12694 445 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 ITGALP20701 1170 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 TACR1P25103 407 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 SOAT1P35610 550 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 ALDH7A1P49419 539 aaKnown RBP12.42□□□□□ -0.42
VPS52-218ENST00000482399 ISL1P61371 349 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 USP39Q53GS9 565 aaKnown RBP12.42□□□□□ -0.42
VPS52-218ENST00000482399 TPRG1LQ5T0D9 272 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 USP51Q70EK9 711 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 FAM217AQ8IXS0 508 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 ADAMTS16Q8TE57 1224 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 MAL2Q969L2 176 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 ZNF641Q96N77 438 aaPredicted RBP12.42□□□□□ -0.42
VPS52-218ENST00000482399 CSNK1G1Q9HCP0 422 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 GPRC5BQ9NZH0 403 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 KCNH4Q9UQ05 1017 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 SSC5DA1L4H1 1573 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 LOC285095A0A1B0GVY8 99 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 STK16O75716 305 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 FABP3P05413 133 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 GADD45AP24522 165 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 CSRP3P50461 194 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 FAM214AQ32MH5 1076 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 ZNF404Q494X3 552 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 CARD16Q5EG05 197 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 AADATQ8N5Z0 425 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 GOLM1Q8NBJ4 401 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 STARD8Q92502 1023 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 MUL1Q969V5 352 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 PARK7Q99497 189 aaKnown RBP12.41□□□□□ -0.42
VPS52-218ENST00000482399 MROQ9BYG7 248 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 GIMAP4Q9NUV9 329 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 IL37Q9NZH6 218 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 BTBD3Q9Y2F9 522 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 DLGAP4Q9Y2H0 992 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 TRIP12Q14669 1992 aaPredicted RBP12.41□□□□□ -0.42
VPS52-218ENST00000482399 MBLAC1A4D2B0 266 aaPredicted RBP12.41□□□□□ -0.42
VPS52-218ENST00000482399 UPK1AO00322 258 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 STX16O14662 325 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 PRAMEF11O60813 436 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 PEX11BO96011 259 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 GBAP04062 536 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 PAX3P23760 479 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 GRK3P35626 688 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 KIR3DL1P43629 444 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 RPP38P78345 283 aaKnown RBP12.41□□□□□ -0.42
VPS52-218ENST00000482399 TIAL1Q01085 375 aaKnown RBP eCLIP12.41□□□□□ -0.42
VPS52-218ENST00000482399 CDH18Q13634 790 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 TAF1AQ15573 450 aaPredicted RBP12.41□□□□□ -0.42
VPS52-218ENST00000482399 CTF1Q16619 201 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 COQ5Q5HYK3 327 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 GTF2IRD2BQ6EKJ0 949 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 SLC16A12Q6ZSM3 486 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 ZNF605Q86T29 641 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 GTF2IRD2Q86UP8 949 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 ZNF548Q8NEK5 533 aaPredicted RBP12.41□□□□□ -0.42
VPS52-218ENST00000482399 ATL1Q8WXF7 558 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 SPATA17Q96L03 361 aa12.41□□□□□ -0.42
VPS52-218ENST00000482399 DEPDC7Q96QD5 511 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms