RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 ARSFP54793 590 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 CCZ1BP86790 482 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 CCZ1P86791 482 aaPredicted RBP12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 C1orf189Q5VU69 101 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 LRRC6Q86X45 466 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 DCUN1D3Q8IWE4 304 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 KRT222Q8N1A0 295 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 MPP5Q8N3R9 675 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 RAB42Q8N4Z0 105 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 FAM26EQ8N5C1 309 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 ZNF655Q8N720 491 aaPredicted RBP12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 FDCSPQ8NFU4 85 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 RAD51AP1Q96B01 352 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 FER1L6-AS2Q96M78 137 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 LZTFL1Q9NQ48 299 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 HOMER3Q9NSC5 361 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 IFT80Q9P2H3 777 aaPredicted RBP12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 CIDEBQ9UHD4 219 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 GNPTGQ9UJJ9 305 aa12.95□□□□□ -0.34
CTDSP1-208ENST00000482272 TCRBV7S3A2A0A539 114 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 PEX12O00623 359 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 KLHL41O60662 606 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 KLF7O75840 302 aaPredicted RBP12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 FGGP02679 453 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 PIM1P11309 404 aaPredicted RBP12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 MAGP20916 626 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 ALAS2P22557 587 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 OTX2P32243 289 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 FOLR3P41439 243 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 KCNJ1P48048 391 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 SARNPP82979 210 aaKnown RBP12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 SF1Q15637 639 aaKnown RBP12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 NADK2Q4G0N4 442 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 ZC3H12BQ5HYM0 836 aaKnown RBP12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 ZNF662Q6ZS27 426 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 SDCCAG8Q86SQ7 713 aaPredicted RBP12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 FAM20CQ8IXL6 584 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 C2orf73Q8N5S3 287 aaPredicted RBP12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 OR2L8Q8NGY9 312 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 CPT1CQ8TCG5 803 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 SKA2Q8WVK7 121 aaPredicted RBP12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 DLG3Q92796 817 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 PTERQ96BW5 349 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 FOPNLQ96NB1 174 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 GBP5Q96PP8 586 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 MENTQ9BUN1 341 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 RAB11FIP5Q9BXF6 653 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 P2RY12Q9H244 342 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 TREX1Q9NSU2 369 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 EURLQ9NYK6 297 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 GPR83Q9NYM4 423 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 ANKMY1Q9P2S6 941 aa12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 DHCR7Q9UBM7 475 aaKnown RBP12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 PTRH2Q9Y3E5 179 aaKnown RBP12.94□□□□□ -0.34
CTDSP1-208ENST00000482272 KRT87PA6NCN2 255 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 RASGRF2O14827 1237 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 FKBP9O95302 570 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 RPS3P23396 243 aaKnown RBP eCLIP12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 ARNTP27540 789 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 NMBRP28336 390 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 FOXL2P58012 376 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 CDK16Q00536 496 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 ATP1A4Q13733 1029 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 GRB7Q14451 532 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 MRNIPQ6NTE8 343 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 LRRC8BQ6P9F7 803 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 OTOAQ7RTW8 1153 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 MCATQ8IVS2 390 aaKnown RBP12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 OTUD6BQ8N6M0 293 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 LINC01555Q8NAE3 123 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 TRIM58Q8NG06 486 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 MAGEC3Q8TD91 643 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 ZUFSPQ96AP4 578 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 KIFC1Q9BW19 673 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 NUDT9Q9BW91 350 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 SLAMF7Q9NQ25 335 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 C5AR2Q9P296 337 aa12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 TTC7AQ9ULT0 858 aaPredicted RBP12.93□□□□□ -0.34
CTDSP1-208ENST00000482272 TARM1B6A8C7 271 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 CEP104O60308 925 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 F7P08709 466 aaPredicted RBP12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 ATXN8OSP0DMR3 200 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 TPSB2P20231 275 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 MGAT1P26572 445 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 VARSP26640 1264 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 CXCR5P32302 372 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 CCNFP41002 786 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 EIF3BP55884 814 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 TPSAB1Q15661 275 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 NKAIN1Q4KMZ8 207 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 TCTE1Q5JU00 501 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 YOD1Q5VVQ6 348 aaPredicted RBP12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 JMJD6Q6NYC1 403 aaPredicted RBP12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 MRPL14Q6P1L8 145 aaKnown RBP12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 FIGLAQ6QHK4 219 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 CES3Q6UWW8 571 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 TTLL10Q6ZVT0 673 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 CLEC1AQ8NC01 280 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 GALNT11Q8NCW6 608 aa12.92□□□□□ -0.34
CTDSP1-208ENST00000482272 OR2Y1Q8NGV0 311 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms