RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 ZBTB2Q8N680 514 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 LMNTD1Q8N9Z9 388 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 PROKR1Q8TCW9 393 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 SLC22A18Q96BI1 424 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 CLIP3Q96DZ5 547 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 PANX3Q96QZ0 392 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 ING2Q9H160 280 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 SLC22A11Q9NSA0 550 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 SYBUQ9NX95 663 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 KLHL42Q9P2K6 505 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 ANAPC5Q9UJX4 755 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 PLCL2Q9UPR0 1127 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 TDRKHQ9Y2W6 561 aaKnown RBP9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 JRKLQ9Y4A0 524 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 PCDHGB7Q9Y5F8 929 aa9.36□□□□□ -0.91
TMEM39A-207ENST00000482162 FAM237BA0A1B0GVD1 139 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 MAGEB16A2A368 324 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 FITM1A5D6W6 292 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 TARM1B6A8C7 271 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 H3BMM5 538 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 RASGRF2O14827 1237 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 ZSCAN9O15535 394 aaPredicted RBP9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 AVILO75366 819 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 NDUFS3O75489 264 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 ESR1P03372 595 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 CD63P08962 238 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 CBSLP0DN79 551 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 ERGP11308 486 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 NR1D1P20393 614 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 ITGAXP20702 1163 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 OGNP20774 298 aaKnown RBP9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 AGXTP21549 392 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 CBSP35520 551 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 PTGIRP43119 386 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 SOX8P57073 446 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 BASP1P80723 227 aaKnown RBP9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 SSPNQ14714 243 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 CYP2A13Q16696 494 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 FAM69BQ5VUD6 431 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 ANKRD22Q5VYY1 191 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 CPZQ66K79 652 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 FCRL6Q6DN72 434 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 PTRHD1Q6GMV3 140 aaKnown RBP9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 MRNIPQ6NTE8 343 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 CES3Q6UWW8 571 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 CENPUQ71F23 418 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 MED25Q71SY5 747 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 GSTA5Q7RTV2 222 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 CILP2Q8IUL8 1156 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 MCATQ8IVS2 390 aaKnown RBP9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 TMEM102Q8N9M5 508 aaPredicted RBP9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 OR2A1Q8NGT9 310 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 DENND1AQ8TEH3 1009 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 PCSK5Q92824 1860 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 ZUFSPQ96AP4 578 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 MIB2Q96AX9 1013 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 RAD51AP1Q96B01 352 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 NACC2Q96BF6 587 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 PBKQ96KB5 322 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 C17orf62Q9BQA9 187 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 KCNF1Q9H3M0 494 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 EURLQ9NYK6 297 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 GNPTGQ9UJJ9 305 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 PLAGL1Q9UM63 463 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 SNX7Q9UNH6 387 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 SRPK3Q9UPE1 567 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 MED16Q9Y2X0 877 aa9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.35□□□□□ -0.91
TMEM39A-207ENST00000482162 NAV2Q8IVL1 2488 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 USP9XQ93008 2570 aaPredicted RBP9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 DOPEY2Q9Y3R5 2298 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 ZCWPW2A0A1B0GU75 182 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 A0A1W2PPV9 198 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 SDR42E2A6NKP2 422 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 ISM1B1AKI9 464 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 ZSCAN12O43309 604 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 CNOT3O75175 753 aaKnown RBP9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 TMEM63AO94886 807 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 MAGP20916 626 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 COILP38432 576 aaPredicted RBP9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 CCNFP41002 786 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 GRIA3P42263 894 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 CSE1LP55060 971 aaKnown RBP9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 DCDP81605 110 aaKnown RBP9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 GPS1Q13098 491 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 TMED2Q15363 201 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 IGFBP7Q16270 282 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 KCTD19Q17RG1 926 aaPredicted RBP9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 CCSMST1Q4G0I0 132 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 NKAIN1Q4KMZ8 207 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 ANKRD20A4Q4UJ75 823 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 RNF187Q5TA31 235 aaPredicted RBP9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 YOD1Q5VVQ6 348 aaPredicted RBP9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 NEPROQ6NW34 567 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 FIGLAQ6QHK4 219 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 OTOAQ7RTW8 1153 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 SDCCAG8Q86SQ7 713 aaPredicted RBP9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 HOOK3Q86VS8 718 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 HPS6Q86YV9 775 aa9.34□□□□□ -0.91
TMEM39A-207ENST00000482162 REXO1L1PQ8IX06 675 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms