RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 SFTPA2Q8IWL1 248 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 SRRM1Q8IYB3 904 aaKnown RBP11.29□□□□□ -0.6
HPS4-212ENST00000481910 PDLIM5Q96HC4 596 aaKnown RBP11.29□□□□□ -0.6
HPS4-212ENST00000481910 FOPNLQ96NB1 174 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 UCN2Q96RP3 112 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 INSM2Q96T92 566 aaPredicted RBP11.29□□□□□ -0.6
HPS4-212ENST00000481910 UQCC2Q9BRT2 126 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 DUSP23Q9BVJ7 150 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 IMP3Q9NV31 184 aaKnown RBP11.29□□□□□ -0.6
HPS4-212ENST00000481910 PCMTD2Q9NV79 361 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 NLGN3Q9NZ94 848 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 SIRPGQ9P1W8 387 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.29□□□□□ -0.6
HPS4-212ENST00000481910 RUVBL2Q9Y230 463 aaKnown RBP11.29□□□□□ -0.6
HPS4-212ENST00000481910 ASF1AQ9Y294 204 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 ARID1BQ8NFD5 2236 aaPredicted RBP11.29□□□□□ -0.6
HPS4-212ENST00000481910 TMEM238LA0A1B0GVL6 79 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 A0A1W2PRQ8 180 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 HTR3EA5X5Y0 456 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 A6NCN8 305 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 OR5K4A6NMS3 321 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 SMIM24O75264 130 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 LTA4HP09960 611 aaKnown RBP11.29□□□□□ -0.6
HPS4-212ENST00000481910 GIMD1P0DJR0 217 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 MPC1LP0DKB6 136 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 ALPPL2P10696 532 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 SLC26A3P40879 764 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 FOXR1Q6PIV2 292 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 KCTD4Q8WVF5 259 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 DYDC1Q8WWB3 177 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 PATE1Q8WXA2 126 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 NXNL1Q96CM4 212 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 DERL2Q9GZP9 239 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 STMN4Q9H169 189 aaPredicted RBP11.29□□□□□ -0.6
HPS4-212ENST00000481910 TMEM9BQ9NQ34 198 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 POLG2Q9UHN1 485 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 CAPN7Q9Y6W3 813 aa11.29□□□□□ -0.6
HPS4-212ENST00000481910 ANKRD12Q6UB98 2062 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 KIR2DS5A0A0G2JLQ3 304 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 A0A0G2JNG1 304 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 KIR2DS3K7RE56 304 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 ZNF254O75437 659 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 KLHL2O95198 593 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 MATN4O95460 622 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 CD1DP15813 335 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 DLG1Q12959 904 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 KRT33BQ14525 404 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 KIR2DS5Q14953 304 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 RPE65Q16518 533 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 FAM83EQ2M2I3 478 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 C6orf132Q5T0Z8 1188 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 OGFOD3Q6PK18 319 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 DGLUCYQ7Z3D6 616 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 CENPLQ8N0S6 344 aaPredicted RBP11.28□□□□□ -0.6
HPS4-212ENST00000481910 C4orf33Q8N1A6 199 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 PLD6Q8N2A8 252 aaKnown RBP11.28□□□□□ -0.6
HPS4-212ENST00000481910 SFRP1Q8N474 314 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 EID2Q8N6I1 236 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 OR4C6Q8NH72 309 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 ASB11Q8WXH4 323 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 CXorf40BQ96DE9 158 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 TSNARE1Q96NA8 513 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 FERD3LQ96RJ6 166 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 NMRAL1Q9HBL8 299 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 TMBIM4Q9HC24 238 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 ZNF624Q9P2J8 865 aaPredicted RBP11.28□□□□□ -0.6
HPS4-212ENST00000481910 EP300Q09472 2414 aaPredicted RBP11.28□□□□□ -0.6
HPS4-212ENST00000481910 MYO15AQ9UKN7 3530 aa11.28□□□□□ -0.6
HPS4-212ENST00000481910 BTN3A1O00481 513 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 TRIM38O00635 465 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 ZBTB14O43829 449 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 MTHFD1P11586 935 aaKnown RBP11.27□□□□□ -0.6
HPS4-212ENST00000481910 COL6A2P12110 1019 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 XRCC1P18887 633 aaPredicted RBP11.27□□□□□ -0.6
HPS4-212ENST00000481910 SLC19A1P41440 591 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 MAPK9P45984 424 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 ATP6V0D1P61421 351 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 SLC14A1Q13336 389 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 BLMHQ13867 455 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 KLC3Q6P597 504 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 SH2D5Q6ZV89 423 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 SLC9B2Q86UD5 537 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 TRIM48Q8IWZ4 208 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 MAPK15Q8TD08 544 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 NSRP1Q9H0G5 558 aaKnown RBP11.27□□□□□ -0.6
HPS4-212ENST00000481910 ZNF358Q9NW07 568 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 SENP1Q9P0U3 644 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 DCDC2Q9UHG0 476 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 NOVA2Q9UNW9 492 aaKnown RBP11.27□□□□□ -0.6
HPS4-212ENST00000481910 PCDHGB2Q9Y5G2 931 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 HEBP2Q9Y5Z4 205 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 COLEC10Q9Y6Z7 277 aa11.27□□□□□ -0.6
HPS4-212ENST00000481910 GOLGA4Q13439 2230 aaKnown RBP11.27□□□□□ -0.6
HPS4-212ENST00000481910 C4orf47A7E2U8 309 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 CDC7O00311 574 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 SIGLEC6O43699 453 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 GDF9O60383 454 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 NOBOXO60393 691 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 PSIP1O75475 530 aaKnown RBP11.27□□□□□ -0.61
HPS4-212ENST00000481910 TOP3BO95985 862 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms