RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 JMJD6Q6NYC1 403 aaPredicted RBP14.68□□□□□ -0.06
LIMS3-203ENST00000480744 TLDC1Q6P9B6 456 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 DNAJC22Q8N4W6 341 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 OTUD6BQ8N6M0 293 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 GALNT11Q8NCW6 608 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 GSDMBQ8TAX9 411 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 PROKR1Q8TCW9 393 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 ASZ1Q8WWH4 475 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 IL17FQ96PD4 163 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 GBP5Q96PP8 586 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 CARD6Q9BX69 1037 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 CHRNA10Q9GZZ6 450 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 CHRAC1Q9NRG0 131 aa14.68□□□□□ -0.06
LIMS3-203ENST00000480744 MARCH4Q9P2E8 410 aaPredicted RBP14.68□□□□□ -0.06
LIMS3-203ENST00000480744 USP9XQ93008 2570 aaPredicted RBP14.67□□□□□ -0.06
LIMS3-203ENST00000480744 PCM1Q15154 2024 aa14.67□□□□□ -0.06
LIMS3-203ENST00000480744 CD3EAPO15446 510 aaKnown RBP14.67□□□□□ -0.06
LIMS3-203ENST00000480744 SORBS2O94875 1100 aaKnown RBP14.67□□□□□ -0.06
LIMS3-203ENST00000480744 AGFG2O95081 481 aa14.67□□□□□ -0.06
LIMS3-203ENST00000480744 GP1BBP13224 206 aa14.67□□□□□ -0.06
LIMS3-203ENST00000480744 ALAS2P22557 587 aa14.67□□□□□ -0.06
LIMS3-203ENST00000480744 RPL22P35268 128 aaKnown RBP14.67□□□□□ -0.06
LIMS3-203ENST00000480744 CRADDP78560 199 aa14.67□□□□□ -0.06
LIMS3-203ENST00000480744 BASP1P80723 227 aaKnown RBP14.67□□□□□ -0.06
LIMS3-203ENST00000480744 SSPNQ14714 243 aa14.67□□□□□ -0.06
LIMS3-203ENST00000480744 INPP5JQ15735 1006 aaPredicted RBP14.67□□□□□ -0.06
LIMS3-203ENST00000480744 NKAIN1Q4KMZ8 207 aa14.67□□□□□ -0.06
LIMS3-203ENST00000480744 PCID2Q5JVF3 399 aa14.67□□□□□ -0.06
LIMS3-203ENST00000480744 UNC5DQ6UXZ4 953 aa14.67□□□□□ -0.06
LIMS3-203ENST00000480744 DCUN1D3Q8IWE4 304 aa14.67□□□□□ -0.06
LIMS3-203ENST00000480744 LINC01555Q8NAE3 123 aa14.67□□□□□ -0.06
LIMS3-203ENST00000480744 SKA2Q8WVK7 121 aaPredicted RBP14.67□□□□□ -0.06
LIMS3-203ENST00000480744 IP6K3Q96PC2 410 aa14.67□□□□□ -0.06
LIMS3-203ENST00000480744 EURLQ9NYK6 297 aa14.67□□□□□ -0.06
LIMS3-203ENST00000480744 SLC39A10Q9ULF5 831 aa14.67□□□□□ -0.06
LIMS3-203ENST00000480744 MAP4K5Q9Y4K4 846 aa14.67□□□□□ -0.06
LIMS3-203ENST00000480744 PRRC2CQ9Y520 2896 aaKnown RBP14.66□□□□□ -0.06
LIMS3-203ENST00000480744 PRMT5O14744 637 aaPredicted RBP14.66□□□□□ -0.06
LIMS3-203ENST00000480744 GPC4O75487 556 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 CD63P08962 238 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 CD9P21926 228 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 AOAHP28039 575 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 TTPAP49638 278 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 FHL5Q5TD97 284 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 SLC6A19Q695T7 634 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 TTC23LQ6PF05 361 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 TTLL10Q6ZVT0 673 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 GSTA5Q7RTV2 222 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 HPS6Q86YV9 775 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 MCATQ8IVS2 390 aaKnown RBP14.66□□□□□ -0.06
LIMS3-203ENST00000480744 RBMXL3Q8N7X1 1067 aaKnown RBP14.66□□□□□ -0.06
LIMS3-203ENST00000480744 CLEC1AQ8NC01 280 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 OR2Y1Q8NGV0 311 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 DLG3Q92796 817 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 PEX13Q92968 403 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 SLC22A18Q96BI1 424 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 FER1L6-AS2Q96M78 137 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 LRRC4CQ9HCJ2 640 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 INTS7Q9NVH2 962 aaKnown RBP14.66□□□□□ -0.06
LIMS3-203ENST00000480744 P4HTMQ9NXG6 502 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 GNPTGQ9UJJ9 305 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 TSR3Q9UJK0 312 aaKnown RBP14.66□□□□□ -0.06
LIMS3-203ENST00000480744 USP9YO00507 2555 aaPredicted RBP14.66□□□□□ -0.06
LIMS3-203ENST00000480744 SPTBN1Q01082 2364 aaKnown RBP14.66□□□□□ -0.06
LIMS3-203ENST00000480744 DOCK10Q96BY6 2186 aa14.66□□□□□ -0.06
LIMS3-203ENST00000480744 UTP20O75691 2785 aaKnown RBP14.65□□□□□ -0.06
LIMS3-203ENST00000480744 SPTAN1Q13813 2472 aaKnown RBP14.65□□□□□ -0.06
LIMS3-203ENST00000480744 MASP2O00187 686 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 CNOT3O75175 753 aaKnown RBP14.65□□□□□ -0.06
LIMS3-203ENST00000480744 NDUFS3O75489 264 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 S1PR4O95977 384 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 NMBRP28336 390 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 GRIA3P42263 894 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 BDKRB1P46663 353 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 EIF3BP55884 814 aaKnown RBP14.65□□□□□ -0.06
LIMS3-203ENST00000480744 CCZ1BP86790 482 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 CCZ1P86791 482 aaPredicted RBP14.65□□□□□ -0.06
LIMS3-203ENST00000480744 GRB7Q14451 532 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 SF1Q15637 639 aaKnown RBP14.65□□□□□ -0.06
LIMS3-203ENST00000480744 CCNG2Q16589 344 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 CYP2A13Q16696 494 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 DCAF10Q5QP82 559 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 MEI1Q5TIA1 1274 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 VWA5B1Q5TIE3 1220 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 TMEM151BQ8IW70 566 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 Q8NA96 180 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 OR2L8Q8NGY9 312 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 PNPLA2Q96AD5 504 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 PTERQ96BW5 349 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 PANX3Q96QZ0 392 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 SMAD5Q99717 465 aaKnown RBP14.65□□□□□ -0.06
LIMS3-203ENST00000480744 MENTQ9BUN1 341 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 EIF2B3Q9NR50 452 aaKnown RBP14.65□□□□□ -0.06
LIMS3-203ENST00000480744 BFARQ9NZS9 450 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 RUVBL2Q9Y230 463 aaKnown RBP14.65□□□□□ -0.06
LIMS3-203ENST00000480744 ICE1Q9Y2F5 2266 aa14.65□□□□□ -0.06
LIMS3-203ENST00000480744 MDC1Q14676 2089 aaKnown RBP14.65□□□□□ -0.06
LIMS3-203ENST00000480744 RASGRF2O14827 1237 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 SLCO2B1O94956 709 aa14.64□□□□□ -0.07
LIMS3-203ENST00000480744 IGHEP01854 428 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms