RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 IKBKGQ9Y6K9 419 aa14.11□□□□□ -0.15
USP11-207ENST00000478596 A0A087WUV0 522 aaPredicted RBP14.1□□□□□ -0.15
USP11-207ENST00000478596 TCRBV9S1A1TA0A576 114 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 MTX2O75431 263 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 PRSS56P0CW18 603 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 OGNP20774 298 aaKnown RBP14.1□□□□□ -0.15
USP11-207ENST00000478596 PTPN4P29074 926 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 FOXN2P32314 431 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 ACTR1BP42025 376 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 SLC1A2P43004 574 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 ACTR1AP61163 376 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 XIAPP98170 497 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 CDK3Q00526 305 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 ART3Q13508 389 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 BRD3Q15059 726 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 GPRC6AQ5T6X5 926 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 TRMT10BQ6PF06 316 aaKnown RBP14.1□□□□□ -0.15
USP11-207ENST00000478596 MARK2Q7KZI7 788 aaKnown RBP14.1□□□□□ -0.15
USP11-207ENST00000478596 DET1Q7L5Y6 550 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 SERPINA9Q86WD7 417 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 PELI3Q8N2H9 469 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 NXPE1Q8N323 547 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 SLC37A2Q8TED4 501 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 FBF1Q8TES7 1133 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 AENQ8WTP8 325 aaKnown RBP14.1□□□□□ -0.15
USP11-207ENST00000478596 MRRFQ96E11 262 aaKnown RBP14.1□□□□□ -0.15
USP11-207ENST00000478596 VPS35Q96QK1 796 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 SMAD5Q99717 465 aaKnown RBP14.1□□□□□ -0.15
USP11-207ENST00000478596 TEX101Q9BY14 249 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 NSMCE4AQ9NXX6 385 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 RAB21Q9UL25 225 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 B3GNT3Q9Y2A9 372 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 VPS9D1Q9Y2B5 631 aa14.1□□□□□ -0.15
USP11-207ENST00000478596 MN1Q10571 1320 aaPredicted RBP14.1□□□□□ -0.15
USP11-207ENST00000478596 DIDO1Q9BTC0 2240 aaKnown RBP14.09□□□□□ -0.15
USP11-207ENST00000478596 EXOC1LA0A1B0GW35 172 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 CCDC151A5D8V7 595 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 F8W8V4 182 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 GAPDHSO14556 408 aaPredicted RBP14.09□□□□□ -0.15
USP11-207ENST00000478596 CTIFO43310 598 aaKnown RBP14.09□□□□□ -0.15
USP11-207ENST00000478596 FGF5P12034 268 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 ACRV1P26436 265 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 EPHA4P54764 986 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 EIF3BP55884 814 aaKnown RBP14.09□□□□□ -0.15
USP11-207ENST00000478596 IFFO1Q0D2I5 559 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 IL10RAQ13651 578 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 DBN1Q16643 649 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 KLHL38Q2WGJ6 581 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 CERS6Q6ZMG9 384 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 TAOK1Q7L7X3 1001 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 LDB1Q86U70 411 aaPredicted RBP14.09□□□□□ -0.15
USP11-207ENST00000478596 TRAPPC5Q8IUR0 188 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 RELL1Q8IUW5 271 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 RASGRP3Q8IV61 690 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 LMNTD2Q8IXW0 634 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 PPM1NQ8N819 430 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 CAVIN3Q969G5 261 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 RNF31Q96EP0 1072 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 CCDC77Q9BR77 488 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 OR2AG1Q9H205 316 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 EPB41L1Q9H4G0 881 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 FBXO6Q9NRD1 293 aaPredicted RBP14.09□□□□□ -0.15
USP11-207ENST00000478596 SMOXQ9NWM0 555 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 ZDHHC3Q9NYG2 299 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 MARCH4Q9P2E8 410 aaPredicted RBP14.09□□□□□ -0.15
USP11-207ENST00000478596 SLC17A6Q9P2U8 582 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 COPG2Q9UBF2 871 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 KLHL3Q9UH77 587 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 LNPEPQ9UIQ6 1025 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 SLC17A4Q9Y2C5 497 aa14.09□□□□□ -0.15
USP11-207ENST00000478596 COPG1Q9Y678 874 aaKnown RBP14.09□□□□□ -0.15
USP11-207ENST00000478596 RIPK2O43353 540 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 SOD1P00441 154 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 IVLP07476 585 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 ZNF7P17097 686 aaPredicted RBP14.08□□□□□ -0.16
USP11-207ENST00000478596 ARNTP27540 789 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 TEAD1P28347 426 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 PBLDP30039 288 aaPredicted RBP14.08□□□□□ -0.16
USP11-207ENST00000478596 ARCN1P48444 511 aaKnown RBP14.08□□□□□ -0.16
USP11-207ENST00000478596 CDKN1CP49918 316 aaPredicted RBP14.08□□□□□ -0.16
USP11-207ENST00000478596 GPX6P59796 221 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 MPP1Q00013 466 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 EFTUD2Q15029 972 aaKnown RBP eCLIP14.08□□□□□ -0.164e-6■■■■□ 25.8
USP11-207ENST00000478596 PLA2G4EQ3MJ16 856 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 KBTBD12Q3ZCT8 623 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.08□□□□□ -0.16
USP11-207ENST00000478596 ZNF648Q5T619 568 aaPredicted RBP14.08□□□□□ -0.16
USP11-207ENST00000478596 PTRHD1Q6GMV3 140 aaKnown RBP14.08□□□□□ -0.16
USP11-207ENST00000478596 CRTC3Q6UUV7 619 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 PLXDC1Q8IUK5 500 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 CILP2Q8IUL8 1156 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 DENND6AQ8IWF6 608 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 PIANPQ8IYJ0 282 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 DDHD1Q8NEL9 900 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 HEXDCQ8WVB3 486 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 SCARF2Q96GP6 870 aaPredicted RBP14.08□□□□□ -0.16
USP11-207ENST00000478596 OR6C1Q96RD1 312 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 CYTH2Q99418 400 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 TSSK1BQ9BXA7 367 aa14.08□□□□□ -0.16
USP11-207ENST00000478596 TRIM8Q9BZR9 551 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms