RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 FETUBQ9UGM5 382 aa25.93■■□□□ 1.74
CCM2-211ENST00000478582 CELSR3Q9NYQ7 3312 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 C2orf74A8MZ97 194 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 CHRM5P08912 532 aaPredicted RBP25.92■■□□□ 1.74
CCM2-211ENST00000478582 ERGP11308 486 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 ITPKBP27987 946 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 MSH2P43246 934 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 SERPINB9P50453 376 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 PPP1CAP62136 330 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 C16orf72Q14CZ0 275 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 UAP1Q16222 522 aaPredicted RBP25.92■■□□□ 1.74
CCM2-211ENST00000478582 UBE2R2Q712K3 238 aaPredicted RBP25.92■■□□□ 1.74
CCM2-211ENST00000478582 RAB11FIP2Q7L804 512 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 FBXO39Q8N4B4 442 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 LINC01555Q8NAE3 123 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 RCBTB1Q8NDN9 531 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 DENND1AQ8TEH3 1009 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 AENQ8WTP8 325 aaKnown RBP25.92■■□□□ 1.74
CCM2-211ENST00000478582 DLG3Q92796 817 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 CMKLR1Q99788 373 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 DHRS4Q9BTZ2 278 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 LNPEPQ9UIQ6 1025 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 ADAMTS6Q9UKP5 1117 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 POMT2Q9UKY4 750 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 RAB21Q9UL25 225 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 IKBKGQ9Y6K9 419 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 CHD6Q8TD26 2715 aa25.92■■□□□ 1.74
CCM2-211ENST00000478582 EXOC1LA0A1B0GW35 172 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 PIPSLA2A3N6 862 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 PMS2P1A4D2B8 440 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 PLD2O14939 933 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 TNFSF15O95150 251 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 MAP4P27816 1152 aaKnown RBP25.91■■□□□ 1.74
CCM2-211ENST00000478582 CRABP2P29373 138 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 PRDX3P30048 256 aaKnown RBP25.91■■□□□ 1.74
CCM2-211ENST00000478582 HSD17B2P37059 387 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 CSRP3P50461 194 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 KPNA2P52292 529 aaKnown RBP25.91■■□□□ 1.74
CCM2-211ENST00000478582 ARHGAP19Q14CB8 494 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 CYP2A13Q16696 494 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 SNAP47Q5SQN1 464 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 EMBQ6PCB8 327 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 FAM92BQ6ZTR7 304 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 AGBL5Q8NDL9 886 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 MCOLN3Q8TDD5 553 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 DCAKDQ8WVC6 231 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 ANKRD49Q8WVL7 239 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 KLHL6Q8WZ60 621 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 IL17FQ96PD4 163 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 PKP4Q99569 1192 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 ZNF768Q9H5H4 540 aaKnown RBP25.91■■□□□ 1.74
CCM2-211ENST00000478582 PARVBQ9HBI1 364 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 ACTR10Q9NZ32 417 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 AKAP7Q9P0M2 348 aaPredicted RBP25.91■■□□□ 1.74
CCM2-211ENST00000478582 KLHL3Q9UH77 587 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 CIDEBQ9UHD4 219 aa25.91■■□□□ 1.74
CCM2-211ENST00000478582 RALYQ9UKM9 306 aaKnown RBP25.91■■□□□ 1.74
CCM2-211ENST00000478582 GSAPA4D1B5 854 aa25.9■■□□□ 1.74
CCM2-211ENST00000478582 TLCD2A6NGC4 264 aa25.9■■□□□ 1.74
CCM2-211ENST00000478582 A8MU76 341 aa25.9■■□□□ 1.74
CCM2-211ENST00000478582 CDRT15L2A8MXV6 281 aa25.9■■□□□ 1.74
CCM2-211ENST00000478582 POC1B-GALNT4F8VUJ3 575 aa25.9■■□□□ 1.74
CCM2-211ENST00000478582 PHGDHO43175 533 aaKnown RBP25.9■■□□□ 1.74
CCM2-211ENST00000478582 KIF1CO43896 1103 aaKnown RBP25.9■■□□□ 1.74
CCM2-211ENST00000478582 CYP2A7P20853 494 aa25.9■■□□□ 1.74
CCM2-211ENST00000478582 CNTFP26441 200 aa25.9■■□□□ 1.74
CCM2-211ENST00000478582 KIR2DS3Q14952 304 aa25.9■■□□□ 1.74
CCM2-211ENST00000478582 MROH9Q5TGP6 573 aa25.9■■□□□ 1.74
CCM2-211ENST00000478582 CACHD1Q5VU97 1274 aa25.9■■□□□ 1.74
CCM2-211ENST00000478582 ANKS6Q68DC2 871 aa25.9■■□□□ 1.74
CCM2-211ENST00000478582 CCDC91Q7Z6B0 441 aa25.9■■□□□ 1.74
CCM2-211ENST00000478582 UBXN10Q96LJ8 280 aa25.9■■□□□ 1.74
CCM2-211ENST00000478582 MAP3K3Q99759 626 aa25.9■■□□□ 1.74
CCM2-211ENST00000478582 DERL2Q9GZP9 239 aa25.9■■□□□ 1.74
CCM2-211ENST00000478582 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.9■■□□□ 1.74
CCM2-211ENST00000478582 NOVA2Q9UNW9 492 aaKnown RBP25.9■■□□□ 1.74
CCM2-211ENST00000478582 PDE10AQ9Y233 779 aa25.9■■□□□ 1.74
CCM2-211ENST00000478582 GCAP28676 217 aa25.89■■□□□ 1.74
CCM2-211ENST00000478582 CSTF2P33240 577 aaKnown RBP eCLIP25.89■■□□□ 1.743e-8■■■■■ 39.8
CCM2-211ENST00000478582 BMPR2Q13873 1038 aa25.89■■□□□ 1.74
CCM2-211ENST00000478582 TAOK1Q7L7X3 1001 aa25.89■■□□□ 1.74
CCM2-211ENST00000478582 KMT5CQ86Y97 462 aa25.89■■□□□ 1.74
CCM2-211ENST00000478582 FLVCR1-AS1Q8TAF5 88 aa25.89■■□□□ 1.74
CCM2-211ENST00000478582 SLC22A18Q96BI1 424 aa25.89■■□□□ 1.74
CCM2-211ENST00000478582 OR2A14Q96R47 310 aa25.89■■□□□ 1.74
CCM2-211ENST00000478582 CCDC77Q9BR77 488 aa25.89■■□□□ 1.74
CCM2-211ENST00000478582 PITPNM3Q9BZ71 974 aa25.89■■□□□ 1.74
CCM2-211ENST00000478582 C1GALT1Q9NS00 363 aa25.89■■□□□ 1.74
CCM2-211ENST00000478582 SPHK1Q9NYA1 384 aa25.89■■□□□ 1.74
CCM2-211ENST00000478582 LOXL2Q9Y4K0 774 aa25.89■■□□□ 1.74
CCM2-211ENST00000478582 ZFHX4Q86UP3 3567 aa25.89■■□□□ 1.73
CCM2-211ENST00000478582 LAMA5O15230 3695 aa25.89■■□□□ 1.73
CCM2-211ENST00000478582 FAM208BQ5VWN6 2430 aa25.88■■□□□ 1.73
CCM2-211ENST00000478582 KRT87PA6NCN2 255 aa25.88■■□□□ 1.73
CCM2-211ENST00000478582 PRICKLE3O43900 615 aaPredicted RBP25.88■■□□□ 1.73
CCM2-211ENST00000478582 RASSF9O75901 435 aa25.88■■□□□ 1.73
CCM2-211ENST00000478582 KRT38O76015 456 aa25.88■■□□□ 1.73
CCM2-211ENST00000478582 ENO2P09104 434 aaPredicted RBP25.88■■□□□ 1.73
CCM2-211ENST00000478582 SLC35E2BP0CK96 405 aa25.88■■□□□ 1.73
CCM2-211ENST00000478582 SLC26A3P40879 764 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms