RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 SATB2Q9UPW6 733 aa2.44□□□□□ -2.02
XRN1-211ENST00000477237 LRCH1Q9Y2L9 728 aa2.44□□□□□ -2.02
XRN1-211ENST00000477237 CLDN16Q9Y5I7 305 aa2.44□□□□□ -2.02
XRN1-211ENST00000477237 TRPV2Q9Y5S1 764 aa2.44□□□□□ -2.02
XRN1-211ENST00000477237 INSRP06213 1382 aa2.44□□□□□ -2.02
XRN1-211ENST00000477237 NPC1L1Q9UHC9 1359 aa2.44□□□□□ -2.02
XRN1-211ENST00000477237 ATP8B3O60423 1300 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 AGRNO00468 2067 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 C15orf38-AP3S2A0A0A6YYH1 394 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 A0A1B0GUA9 196 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 HTR3EA5X5Y0 456 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 NCF1BA6NI72 391 aaPredicted RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 LRRIQ3A6PVS8 624 aaPredicted RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 LGALS16A8MUM7 142 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 NCF1CA8MVU1 366 aaPredicted RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 HHLA1C9JL84 531 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 PLRG1O43660 514 aaKnown RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 SYNCRIPO60506 623 aaKnown RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 CIDEAO60543 219 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 PEX11AO75192 247 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 PTP4A3O75365 173 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 FLOT1O75955 427 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 ERLIN2O94905 339 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 SEC31AO94979 1220 aaKnown RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 KLHL2O95198 593 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 METTL18O95568 372 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 ASNSP08243 561 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 SERPINF2P08697 491 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 ALOX5P09917 674 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 NR2F1P10589 423 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 ANXA8P13928 327 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 POU2F1P14859 743 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 PORP16435 677 aaPredicted RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 ITGA2P17301 1181 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 GPTP24298 496 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 CTNNA2P26232 953 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 U2AF2P26368 475 aaKnown RBP eCLIP2.43□□□□□ -2.02
XRN1-211ENST00000477237 HNRNPH1P31943 449 aaKnown RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 CCR1P32246 355 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 GJC1P36383 396 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 LONP1P36776 959 aaKnown RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 PPP1R2P41236 205 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 HTR2BP41595 481 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 ACAA2P42765 397 aaKnown RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 POU3F4P49335 361 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 THOP1P52888 689 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 ADARP55265 1226 aaKnown RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 MAP3K7CLP57077 242 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 GPX6P59796 221 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 ASIC1P78348 528 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 RBP5P82980 135 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 GFPT1Q06210 699 aaPredicted RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 SMARCB1Q12824 385 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 AIMP1Q12904 312 aaKnown RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 GRIK2Q13002 908 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 CUL1Q13616 776 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 PTK2BQ14289 1009 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 LASP1Q14847 261 aaKnown RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 HERC3Q15034 1050 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 ADIPOQQ15848 244 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 SOWAHAQ2M3V2 549 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 CFAP157Q5JU67 520 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 C1orf185Q5T7R7 199 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 WLSQ5T9L3 541 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 ANXA8L1Q5VT79 327 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 SLC25A24Q6NUK1 477 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 PPP1R2P3Q6NXS1 205 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 JMJD6Q6NYC1 403 aaPredicted RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 FAM171BQ6P995 826 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 KDM7AQ6ZMT4 941 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 PIWIL3Q7Z3Z3 882 aaKnown RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 SLC51BQ86UW2 128 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 FAM160B2Q86V87 743 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 TMEM219Q86XT9 240 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 KMT5CQ86Y97 462 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 HERC6Q8IVU3 1022 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 LRRC34Q8IZ02 419 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 PARP16Q8N5Y8 322 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 FAM133AQ8N9E0 248 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 LPCAT1Q8NF37 534 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 OR9A1PQ8NGU1 263 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 HUS1BQ8NHY5 278 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 ZNF461Q8TAF7 563 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 ETNPPLQ8TBG4 499 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 DDI1Q8WTU0 396 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 UCMAQ8WVF2 138 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 IRGQQ8WZA9 623 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 HSPH1Q92598 858 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 SYN2Q92777 582 aaPredicted RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 SLC22A18Q96BI1 424 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 OPTNQ96CV9 577 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 SGF29Q96ES7 293 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 TMA16Q96EY4 203 aaKnown RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 LTV1Q96GA3 475 aaPredicted RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 PIWIL1Q96J94 861 aaKnown RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 TMEM68Q96MH6 324 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 ZNF560Q96MR9 790 aa2.43□□□□□ -2.02
XRN1-211ENST00000477237 RPRD1AQ96P16 312 aaPredicted RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 NR1H4Q96RI1 486 aaPredicted RBP2.43□□□□□ -2.02
XRN1-211ENST00000477237 TSG101Q99816 390 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms