RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 ILF2Q12905 390 aaKnown RBP9.86□□□□□ -0.83
CCM2-208ENST00000476594 KCNAB2Q13303 367 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 SF1Q15637 639 aaKnown RBP9.86□□□□□ -0.83
CCM2-208ENST00000476594 TCTE1Q5JU00 501 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 SPANXN3Q5MJ09 141 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 CTSL3PQ5NE16 218 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 FBXO38Q6PIJ6 1188 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 CNSTQ6PJW8 725 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 PCSK4Q6UW60 755 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 NEK10Q6ZWH5 1172 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 KCNMB4Q86W47 210 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 VRK3Q8IV63 474 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 KLHL7Q8IXQ5 586 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 PALM2Q8IXS6 379 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 ZNF843Q8N446 348 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 PROKR1Q8TCW9 393 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 CT55Q8WUE5 264 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 THAP4Q8WY91 577 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 BIRC8Q96P09 236 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 OR2A14Q96R47 310 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 NDC1Q9BTX1 674 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 DHRS4Q9BTZ2 278 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 SLC25A18Q9H1K4 315 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 IL17BQ9UHF5 180 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 GPN3Q9UHW5 284 aaPredicted RBP9.86□□□□□ -0.83
CCM2-208ENST00000476594 PLAGL1Q9UM63 463 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 PLCL2Q9UPR0 1127 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 FARSAQ9Y285 508 aaKnown RBP9.86□□□□□ -0.83
CCM2-208ENST00000476594 MAN2B2Q9Y2E5 1009 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 NEU2Q9Y3R4 380 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 FAM169AQ9Y6X4 670 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 COL6A6A6NMZ7 2263 aa9.86□□□□□ -0.83
CCM2-208ENST00000476594 KALRNO60229 2985 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 ZCWPW2A0A1B0GU75 182 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 CDC14CA4D256 554 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 TARM1B6A8C7 271 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 B8ZZF3 427 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 MKRN2OSH3BPM6 223 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 NKX2-8O15522 239 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 ZBTB14O43829 449 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 CCNDBP1O95273 360 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 TIAF1O95411 115 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 C1orf105O95561 183 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 PRB1P04280 392 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 FAM87AP0C7U9 286 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 MPC1LP0DKB6 136 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 PIM1P11309 404 aaPredicted RBP9.85□□□□□ -0.83
CCM2-208ENST00000476594 PVRP15151 417 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 PTPN4P29074 926 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 CMPK1P30085 196 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 SKIV2L2P42285 1042 aaKnown RBP9.85□□□□□ -0.83
CCM2-208ENST00000476594 SLC1A2P43004 574 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 ARSFP54793 590 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 ERV3-1Q14264 604 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 CRYMQ14894 314 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 ARHGAP19Q14CB8 494 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 DEFB109BQ30KR1 87 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 LINC00303Q3SY05 128 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 BBS9Q3SYG4 887 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 CDHR3Q6ZTQ4 885 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 KIAA0408Q6ZU52 694 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 MICALCLQ6ZW33 695 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 CENPUQ71F23 418 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 MAATS1Q7Z4T9 603 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 SYTL1Q8IYJ3 562 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 DSELQ8IZU8 1212 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 TTC29Q8NA56 475 aaPredicted RBP9.85□□□□□ -0.83
CCM2-208ENST00000476594 OR1L3Q8NH93 324 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 HMGCLL1Q8TB92 370 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 ZUFSPQ96AP4 578 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 SNF8Q96H20 258 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 SIGLEC10Q96LC7 697 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 PPM1MQ96MI6 270 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 EBNA1BP2Q99848 306 aaKnown RBP9.85□□□□□ -0.83
CCM2-208ENST00000476594 NLNQ9BYT8 704 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 KLHL25Q9H0H3 589 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 ACTL8Q9H568 366 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 FBXO6Q9NRD1 293 aaPredicted RBP9.85□□□□□ -0.83
CCM2-208ENST00000476594 SPHK1Q9NYA1 384 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 NDOR1Q9UHB4 597 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 TRMT6Q9UJA5 497 aaKnown RBP9.85□□□□□ -0.83
CCM2-208ENST00000476594 FBXO5Q9UKT4 447 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 CORO1CQ9ULV4 474 aaPredicted RBP9.85□□□□□ -0.83
CCM2-208ENST00000476594 SNX7Q9UNH6 387 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 ATMQ13315 3056 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 PIEZO2Q9H5I5 2752 aa9.85□□□□□ -0.83
CCM2-208ENST00000476594 FASNP49327 2511 aaKnown RBP9.84□□□□□ -0.83
CCM2-208ENST00000476594 USP27XA6NNY8 438 aa9.84□□□□□ -0.83
CCM2-208ENST00000476594 ZSCAN9O15535 394 aaPredicted RBP9.84□□□□□ -0.83
CCM2-208ENST00000476594 ZNF749O43361 778 aa9.84□□□□□ -0.83
CCM2-208ENST00000476594 RFPL1O75677 317 aa9.84□□□□□ -0.83
CCM2-208ENST00000476594 MATN4O95460 622 aa9.84□□□□□ -0.83
CCM2-208ENST00000476594 IGHEP01854 428 aa9.84□□□□□ -0.83
CCM2-208ENST00000476594 MAGP20916 626 aa9.84□□□□□ -0.83
CCM2-208ENST00000476594 CASQ1P31415 396 aa9.84□□□□□ -0.83
CCM2-208ENST00000476594 RPA3P35244 121 aaPredicted RBP9.84□□□□□ -0.83
CCM2-208ENST00000476594 BDKRB1P46663 353 aa9.84□□□□□ -0.83
CCM2-208ENST00000476594 DHX9Q08211 1270 aaKnown RBP9.84□□□□□ -0.83
CCM2-208ENST00000476594 NFATC3Q12968 1075 aa9.84□□□□□ -0.83
CCM2-208ENST00000476594 CALCOCO2Q13137 446 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms