RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ATP6AP2O75787 350 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 GSRP00390 522 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 INHBAP08476 426 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 SNRNP70P08621 437 aaKnown RBP5.52□□□□□ -1.53
VPS50-212ENST00000476413 MSH3P20585 1137 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 JAK1P23458 1154 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 WNT5AP41221 380 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 GSDMDP57764 484 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 YWHAHQ04917 246 aaPredicted RBP5.52□□□□□ -1.53
VPS50-212ENST00000476413 TNK1Q13470 666 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 ITPRIPL2Q3MIP1 535 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 FAM174BQ3ZCQ3 159 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 LACTB2Q53H82 288 aaPredicted RBP5.52□□□□□ -1.53
VPS50-212ENST00000476413 ASPRV1Q53RT3 343 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 SUSD4Q5VX71 490 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 TXNRD3NBQ6F5E7 133 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 C11orf63Q6NUN7 778 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 ENPP7Q6UWV6 458 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 NHLRC1Q6VVB1 395 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 C15orf39Q6ZRI6 1047 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 FOXL2NBQ6ZUU3 175 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 IL17RELQ6ZVW7 336 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 NUDT13Q86X67 352 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 PLD3Q8IV08 490 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 FOXP4Q8IVH2 680 aaPredicted RBP5.52□□□□□ -1.53
VPS50-212ENST00000476413 CIARTQ8N365 385 aaPredicted RBP5.52□□□□□ -1.53
VPS50-212ENST00000476413 NHLRC2Q8NBF2 726 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 ATAD1Q8NBU5 361 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 CCDC107Q8WV48 283 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 HSD17B8Q92506 261 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 DNASE1L2Q92874 299 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 PTP4A1Q93096 173 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 SLC47A1Q96FL8 570 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 FAM20AQ96MK3 541 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 DUX5Q96PT3 197 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 MYADMQ96S97 322 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 RTP3Q9BQQ7 232 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 TRAF4Q9BUZ4 470 aaPredicted RBP5.52□□□□□ -1.53
VPS50-212ENST00000476413 S1PR5Q9H228 398 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 COQ3Q9NZJ6 369 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 LIPT1Q9Y234 373 aa5.52□□□□□ -1.53
VPS50-212ENST00000476413 GREB1LQ9C091 1923 aaPredicted RBP5.52□□□□□ -1.53
VPS50-212ENST00000476413 A0A1B0GUV1 79 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 SMTNL1A8MU46 457 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 PLOD2O00469 737 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 STX6O43752 255 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 SELENOFO60613 162 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 FMO6PO60774 539 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 VIMP08670 466 aaKnown RBP5.51□□□□□ -1.53
VPS50-212ENST00000476413 SNHG28P0DPA3 235 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 LBPP18428 481 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 CD27P26842 260 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 KCNJ1P48048 391 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 RGS7P49802 495 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 TAZQ16635 292 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 UGP2Q16851 508 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 CDO1Q16878 200 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 CTU2Q2VPK5 515 aaKnown RBP5.51□□□□□ -1.53
VPS50-212ENST00000476413 ANKRD20A4Q4UJ75 823 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 ZNF585BQ52M93 769 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 ANKRD20A8PQ5CZ79 823 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 ANKRD20A2Q5SQ80 823 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 ANKRD20A1Q5TYW2 823 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 ANKRD20A3Q5VUR7 823 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 NOTUMQ6P988 496 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 ZNF771Q7L3S4 317 aaPredicted RBP5.51□□□□□ -1.53
VPS50-212ENST00000476413 MMD2Q8IY49 270 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 CCDC170Q8IYT3 715 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.51□□□□□ -1.53
VPS50-212ENST00000476413 PIGBQ92521 554 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 SCRN2Q96FV2 425 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 HES6Q96HZ4 224 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 MEIS3Q99687 375 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 GTPBP2Q9BX10 602 aaKnown RBP5.51□□□□□ -1.53
VPS50-212ENST00000476413 ERAP1Q9NZ08 941 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 TRIM17Q9Y577 477 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 PCDHGB1Q9Y5G3 927 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 KIAA1210Q9ULL0 1709 aa5.51□□□□□ -1.53
VPS50-212ENST00000476413 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 DUXAA6NLW8 204 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 PRKNO60260 465 aaPredicted RBP5.5□□□□□ -1.53
VPS50-212ENST00000476413 FCGR3BO75015 233 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 MOCS3O95396 460 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 T-ENOLP0DO92 83 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 DGKAP23743 735 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 MARK3P27448 753 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 PSMB4P28070 264 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 EPHA2P29317 976 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 MNDAP41218 407 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 FMO5P49326 533 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 HOXA1P49639 335 aaPredicted RBP5.5□□□□□ -1.53
VPS50-212ENST00000476413 PDX1P52945 283 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 MFAP3P55082 362 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 MTCP1P56278 107 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 C17orf67Q0P5P2 114 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 PTGISQ16647 500 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 IZUMO4Q1ZYL8 232 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 ZNF674Q2M3X9 581 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 TWISTNBQ3B726 338 aaPredicted RBP5.5□□□□□ -1.53
VPS50-212ENST00000476413 GBP6Q6ZN66 633 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms