RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 C12orf40Q86WS4 652 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 MSRB3Q8IXL7 192 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 GFM2Q969S9 779 aaKnown RBP16.21■□□□□ 0.19
TVP23B-202ENST00000476139 ERLEC1Q96DZ1 483 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 TBCDQ9BTW9 1192 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 KANSL1LA0AUZ9 987 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 SNAP29O95721 258 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 KRT6AP02538 564 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 KRT6BP04259 564 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 CEBPBP17676 345 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 KRT6CP48668 564 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 FXNQ16595 210 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 ZDHHC20Q5W0Z9 365 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 NECAB2Q7Z6G3 386 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 ANKRD46Q86W74 232 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 PHACTR4Q8IZ21 702 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 FAM86B1Q8N7N1 296 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 AURKBQ96GD4 344 aaPredicted RBP16.21■□□□□ 0.19
TVP23B-202ENST00000476139 TSSK3Q96PN8 268 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 OR52E6Q96RD3 313 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 ZBTB18Q99592 522 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 ELOVL6Q9H5J4 265 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 CLMPQ9H6B4 373 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 KLHL42Q9P2K6 505 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 TBC1D14Q9P2M4 693 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 RSL24D1Q9UHA3 163 aaKnown RBP16.21■□□□□ 0.19
TVP23B-202ENST00000476139 PCDHB3Q9Y5E6 796 aa16.21■□□□□ 0.19
TVP23B-202ENST00000476139 ARHGEF15O94989 841 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 C8GP07360 202 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 NFKBIAP25963 317 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 RPS6KA3P51812 740 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 CTSCP53634 463 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 PRSS36Q5K4E3 855 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 INTS11Q5TA45 600 aaKnown RBP16.2■□□□□ 0.18
TVP23B-202ENST00000476139 ARHGAP22Q7Z5H3 698 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 CLVS1Q8IUQ0 354 aaPredicted RBP16.2■□□□□ 0.18
TVP23B-202ENST00000476139 GOLM1Q8NBJ4 401 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 ITFG1Q8TB96 612 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 FIG4Q92562 907 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 NSMCE2Q96MF7 247 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 RAD9AQ99638 391 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.2■□□□□ 0.18
TVP23B-202ENST00000476139 CLOCKO15516 846 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 LRATO95237 230 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 GSNP06396 782 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 MYOGP15173 224 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 DDX6P26196 483 aaKnown RBP eCLIP16.2■□□□□ 0.18
TVP23B-202ENST00000476139 NNMTP40261 264 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 SLC6A12P48065 614 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 PREPP48147 710 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 PPP1R8Q12972 351 aaKnown RBP16.2■□□□□ 0.18
TVP23B-202ENST00000476139 MAD2L1Q13257 205 aaPredicted RBP16.2■□□□□ 0.18
TVP23B-202ENST00000476139 CCSMST1Q4G0I0 132 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 HENMT1Q5T8I9 393 aaKnown RBP16.2■□□□□ 0.18
TVP23B-202ENST00000476139 METTL2BQ6P1Q9 378 aaKnown RBP16.2■□□□□ 0.18
TVP23B-202ENST00000476139 KIAA0907Q7Z7F0 614 aaPredicted RBP16.2■□□□□ 0.18
TVP23B-202ENST00000476139 PROSER1Q86XN7 944 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 C10orf111Q8N326 155 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 APIPQ96GX9 242 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 DCUN1D5Q9BTE7 237 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 MUC13Q9H3R2 512 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 HPS4Q9NQG7 708 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 EBF1Q9UH73 591 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 IL36AQ9UHA7 158 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 KCNE1BA0A087WTH5 132 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 ZNF30P17039 623 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 MAPK10P53779 464 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 PFN3P60673 137 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 DHCR24Q15392 516 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 CHCHD4Q8N4Q1 142 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 PAPD5Q8NDF8 572 aaKnown RBP16.2■□□□□ 0.18
TVP23B-202ENST00000476139 MCOLN3Q8TDD5 553 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 ZFYVE19Q96K21 471 aa16.2■□□□□ 0.18
TVP23B-202ENST00000476139 CARS2Q9HA77 564 aaKnown RBP16.2■□□□□ 0.18
TVP23B-202ENST00000476139 DNAH14Q0VDD8 3507 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 C16orf96A6NNT2 1141 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 TSPAN6O43657 245 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 IL6P05231 212 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 CYP2A6P11509 494 aaPredicted RBP16.19■□□□□ 0.18
TVP23B-202ENST00000476139 CDK4P11802 303 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 VIPR2P41587 438 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 HALP42357 657 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 ATP6AP1Q15904 470 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 ZBTB46Q86UZ6 589 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 RASGEF1AQ8N9B8 481 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 WRAP53Q9BUR4 548 aaKnown RBP16.19■□□□□ 0.18
TVP23B-202ENST00000476139 CDC14AQ9UNH5 594 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 PCDHB14Q9Y5E9 798 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 FADS3Q9Y5Q0 445 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 GRXCR2A6NFK2 248 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 IFRD1O00458 451 aaPredicted RBP16.19■□□□□ 0.18
TVP23B-202ENST00000476139 B4GAT1O43505 415 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 C1QCP02747 245 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 DMC1Q14565 340 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 SF1Q15637 639 aaKnown RBP16.19■□□□□ 0.18
TVP23B-202ENST00000476139 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.19■□□□□ 0.18
TVP23B-202ENST00000476139 PLEKHS1Q5SXH7 462 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 LRRC70Q7Z2Q7 622 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 TBC1D21Q8IYX1 336 aa16.19■□□□□ 0.18
TVP23B-202ENST00000476139 OR2T12Q8NG77 320 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms