RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 FAM72DQ6L9T8 149 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 GALNT5Q7Z7M9 940 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 FAM72BQ86X60 149 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 TCTE3Q8IZS6 198 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 DEFB106AQ8N104 65 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 PROKR1Q8TCW9 393 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 GTF3C2Q8WUA4 911 aaPredicted RBP10.34□□□□□ -0.75
ABCF1-205ENST00000475993 SAMD11Q96NU1 681 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 PPP1R2P1Q96PQ5 205 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 SLC30A2Q9BRI3 323 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 FZD8Q9H461 694 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 NUFIP1Q9UHK0 495 aaKnown RBP10.34□□□□□ -0.75
ABCF1-205ENST00000475993 A0A0G2JMZ2 1700 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 LRRC37A2A6NM11 1700 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 SHROOM3Q8TF72 1996 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 BRCA1P38398 1863 aaKnown RBP10.34□□□□□ -0.75
ABCF1-205ENST00000475993 A0A1B0GTL3 188 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 RAB19A4D1S5 217 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 PTP4A3O75365 173 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 JCHAINP01591 159 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 HOXB3P14651 431 aaPredicted RBP10.34□□□□□ -0.75
ABCF1-205ENST00000475993 SEMA3BQ13214 749 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 TNK1Q13470 666 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 ELOAQ14241 798 aaKnown RBP10.34□□□□□ -0.75
ABCF1-205ENST00000475993 XKR7Q5GH72 579 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 INTS6LQ5JSJ4 861 aaKnown RBP10.34□□□□□ -0.75
ABCF1-205ENST00000475993 PIK3R6Q5UE93 754 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 AHSA2Q719I0 299 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 EFL1Q7Z2Z2 1120 aaKnown RBP10.34□□□□□ -0.75
ABCF1-205ENST00000475993 PRSS42Q7Z5A4 293 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 CCDC36Q8IYA8 594 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 ZNF548Q8NEK5 533 aaPredicted RBP10.34□□□□□ -0.75
ABCF1-205ENST00000475993 OR2T12Q8NG77 320 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 OR8J3Q8NGG0 315 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 NT5C3BQ969T7 300 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 PCYT2Q99447 389 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 RIBC2Q9H4K1 309 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 RNF167Q9H6Y7 350 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 ZNF556Q9HAH1 456 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 IFT46Q9NQC8 304 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 NRBP2Q9NSY0 501 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 NDRG4Q9ULP0 352 aaKnown RBP10.34□□□□□ -0.75
ABCF1-205ENST00000475993 RPH3AQ9Y2J0 694 aaPredicted RBP10.34□□□□□ -0.75
ABCF1-205ENST00000475993 GMPPBQ9Y5P6 360 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 MIA3Q5JRA6 1907 aa10.34□□□□□ -0.75
ABCF1-205ENST00000475993 ARNTLO00327 626 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 ANKRD28O15084 1053 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 SEC22BO75396 215 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 HMGN1P05114 100 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 STAG3L1P0CL83 205 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 HSMCR30P0CW71 290 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 CYP4B1P13584 511 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 MSH3P20585 1137 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 CA5AP35218 305 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 TBCEQ15813 527 aaPredicted RBP10.33□□□□□ -0.76
ABCF1-205ENST00000475993 TIGD6Q17RP2 521 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 PROX2Q3B8N5 592 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 ARHGAP17Q68EM7 881 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 SHQ1Q6PI26 577 aaKnown RBP10.33□□□□□ -0.76
ABCF1-205ENST00000475993 XKRXQ6PP77 449 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 TSPYL5Q86VY4 417 aaPredicted RBP10.33□□□□□ -0.76
ABCF1-205ENST00000475993 OR8H2Q8N162 312 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 ARRDC4Q8NCT1 418 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 SPATA22Q8NHS9 363 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 RIT1Q92963 219 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 SIPA1Q96FS4 1042 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 TMEM209Q96SK2 561 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 MRPL45Q9BRJ2 306 aaKnown RBP10.33□□□□□ -0.76
ABCF1-205ENST00000475993 GABARAPL1Q9H0R8 117 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 ABCG4Q9H172 646 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 ASB7Q9H672 318 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 MAGIXQ9H6Y5 334 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 RNF146Q9NTX7 359 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 TNFSF13BQ9Y275 285 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 SLC45A1Q9Y2W3 748 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 U3KQV3 271 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 NUPL2O15504 423 aaKnown RBP10.33□□□□□ -0.76
ABCF1-205ENST00000475993 WBP4O75554 376 aaKnown RBP10.33□□□□□ -0.76
ABCF1-205ENST00000475993 PCSK2P16519 638 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 TIE1P35590 1138 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 S100A12P80511 92 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 PRKG2Q13237 762 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 SOWAHCQ53LP3 525 aaPredicted RBP10.33□□□□□ -0.76
ABCF1-205ENST00000475993 ARMC4Q5T2S8 1044 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 LRRC8DQ7L1W4 858 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 SYVN1Q86TM6 617 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 PHF21AQ96BD5 680 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 Q96MT0 163 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 TRNT1Q96Q11 434 aaKnown RBP10.33□□□□□ -0.76
ABCF1-205ENST00000475993 TRMT6Q9UJA5 497 aaKnown RBP10.33□□□□□ -0.76
ABCF1-205ENST00000475993 SCML1Q9UN30 329 aa10.33□□□□□ -0.76
ABCF1-205ENST00000475993 AAR2Q9Y312 384 aaKnown RBP10.33□□□□□ -0.76
ABCF1-205ENST00000475993 OR6C70A6NIJ9 312 aa10.32□□□□□ -0.76
ABCF1-205ENST00000475993 LINC00587B1AMM8 73 aa10.32□□□□□ -0.76
ABCF1-205ENST00000475993 GSTA4O15217 222 aa10.32□□□□□ -0.76
ABCF1-205ENST00000475993 GREM1O60565 184 aa10.32□□□□□ -0.76
ABCF1-205ENST00000475993 ALPPP05187 535 aa10.32□□□□□ -0.76
ABCF1-205ENST00000475993 MTHFD2P13995 350 aa10.32□□□□□ -0.76
ABCF1-205ENST00000475993 GZMKP49863 264 aa10.32□□□□□ -0.76
ABCF1-205ENST00000475993 CDKN2DP55273 166 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms