RNA–Protein interactions for RNA: ENST00000475607.1

RABGAP1-209, Transcript of RAB GTPase activating protein 1, human

TSL 4

Gene RABGAP1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RABGAP1-209	ENST00000475607	SLFN11	Q7Z7L1	901 aa		4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	CDK20	Q8IZL9	346 aa		4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	MAPKAPK5-AS1	Q8N8E1	139 aa		4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	OLIG1	Q8TAK6	271 aa		4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	THOC1	Q96FV9	657 aa	Known RBP	4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	SENP5	Q96HI0	755 aa	Predicted RBP	4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	ZNF558	Q96NG5	402 aa		4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	DUX3	Q96PT4	197 aa		4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	F2RL3	Q96RI0	385 aa		4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	FNBP1	Q96RU3	617 aa		4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	CPNE1	Q99829	537 aa		4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	URM1	Q9BTM9	101 aa	Known RBP	4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	CDH20	Q9HBT6	801 aa		4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	SLC52A3	Q9NQ40	469 aa		4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	FGF21	Q9NSA1	209 aa		4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	TXLNG	Q9NUQ3	528 aa		4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	TBC1D7	Q9P0N9	293 aa		4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	KCNJ14	Q9UNX9	436 aa		4.63	□□□□□ -1.67
RABGAP1-209	ENST00000475607	PRR23A	A6NEV1	266 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	PRSS56	P0CW18	603 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	CD22	P20273	847 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	JAK1	P23458	1154 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	CCR10	P46092	362 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	HERV-K104	P61576	105 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	ZNF415	Q09FC8	603 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	GPR17	Q13304	367 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	ITGA7	Q13683	1181 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	HYAL4	Q2M3T9	481 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	KRTAP24-1	Q3LI83	254 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	UGT3A2	Q3SY77	523 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	MCMDC2	Q4G0Z9	681 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	SH2D5	Q6ZV89	423 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	ERN2	Q76MJ5	926 aa	Known RBP	4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	ADCK2	Q7Z695	626 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	TRIM58	Q8NG06	486 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	OR11H4	Q8NGC9	324 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	KIF18A	Q8NI77	898 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	SPSB1	Q96BD6	273 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	OTUB1	Q96FW1	271 aa	Predicted RBP	4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	RAB3IP	Q96QF0	476 aa	Predicted RBP	4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	EGFL8	Q99944	293 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	TRPV4	Q9HBA0	871 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	ANAPC5	Q9UJX4	755 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	RIPK3	Q9Y572	518 aa		4.62	□□□□□ -1.67
RABGAP1-209	ENST00000475607	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	GRID2	O43424	1007 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	CLPTM1	O96005	669 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	AMBP	P02760	352 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	QDPR	P09417	244 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	IRF2	P14316	349 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	FDPS	P14324	419 aa	Known RBP	4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	CYP11B2	P19099	503 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	PTAFR	P25105	342 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	MT3	P25713	68 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	CHRNB4	P30926	498 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	PTGER4	P35408	488 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	ALDH3A2	P51648	485 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	MAZ	P56270	477 aa	Known RBP	4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	B3GALT5-AS1	P59052	145 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	PPIG	Q13427	754 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	VEZF1	Q14119	521 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	FAM133B	Q5BKY9	247 aa	Known RBP	4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	SPDYC	Q5MJ68	293 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	C20orf194	Q5TEA3	1177 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	ZNF329	Q86UD4	541 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	TLK2	Q86UE8	772 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	EXT2	Q93063	718 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	ZNF501	Q96CX3	271 aa	Predicted RBP	4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	GIMAP5	Q96F15	307 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	FER1L6-AS2	Q96M78	137 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	VPS33B	Q9H267	617 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	ST6GALNAC4	Q9H4F1	302 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	TMED3	Q9Y3Q3	217 aa		4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	TCF20	Q9UGU0	1960 aa	Known RBP	4.61	□□□□□ -1.67
RABGAP1-209	ENST00000475607	KIAA1210	Q9ULL0	1709 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	WDR81	Q562E7	1941 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	ENO4	A6NNW6	628 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	ACSL3	O95573	720 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	EML2	O95834	649 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	CSN3	P07498	182 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	IGHV4-31	P0DP07	118 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	CDH3	P22223	829 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	CDR2	Q01850	454 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	KLC1	Q07866	573 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	ZNF876P	Q49A33	203 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	TCTE1	Q5JU00	501 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	ARHGEF16	Q5VV41	709 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	SLC16A9	Q7RTY1	509 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	RTN4RL2	Q86UN3	420 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	APLF	Q8IW19	511 aa	Predicted RBP	4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	KLHDC8B	Q8IXV7	354 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	EID3	Q8N140	333 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	RYBP	Q8N488	228 aa	Predicted RBP	4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	IQUB	Q8NA54	791 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	OR52N5	Q8NH56	324 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	FAM76A	Q8TAV0	307 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	SIPA1	Q96FS4	1042 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	RMDN2	Q96LZ7	410 aa		4.6	□□□□□ -1.67
RABGAP1-209	ENST00000475607	PITPNM3	Q9BZ71	974 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms