RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 INAVAQ3KP66 663 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 SEL1L3Q68CR1 1132 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 TMEM207Q6UWW9 146 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 LRRC69Q6ZNQ3 347 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 UBE2R2Q712K3 238 aaPredicted RBP6.85□□□□□ -1.31
SHQ1-207ENST00000475558 TMPRSS12Q86WS5 348 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 CPNE9Q8IYJ1 553 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 TBC1D21Q8IYX1 336 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 LRRC34Q8IZ02 419 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 CACNA2D3Q8IZS8 1091 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 CLYBLQ8N0X4 340 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 OXR1Q8N573 874 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 PDPRQ8NCN5 879 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 CCDC197Q8NCU1 140 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 ACVR1CQ8NER5 493 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 OR56A4Q8NGH8 313 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 C1orf216Q8TAB5 229 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 SKA2Q8WVK7 121 aaPredicted RBP6.85□□□□□ -1.31
SHQ1-207ENST00000475558 ANKRD49Q8WVL7 239 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 FUBP1Q96AE4 644 aaKnown RBP6.85□□□□□ -1.31
SHQ1-207ENST00000475558 ZBTB9Q96C00 473 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 KLHDC7BQ96G42 594 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 WDR92Q96MX6 357 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 ATOH8Q96SQ7 321 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 FAM107BQ9H098 131 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 ALG9Q9H6U8 611 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 MVB12BQ9H7P6 319 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 KCNK4Q9NYG8 393 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.85□□□□□ -1.31
SHQ1-207ENST00000475558 HAO1Q9UJM8 370 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 PTBP2Q9UKA9 531 aaKnown RBP6.85□□□□□ -1.31
SHQ1-207ENST00000475558 EMCNQ9ULC0 261 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 ITM2BQ9Y287 266 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 ARL2BPQ9Y2Y0 163 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 COQ6Q9Y2Z9 468 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 ANGPTL3Q9Y5C1 460 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 PRSS21Q9Y6M0 314 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 DGKBQ9Y6T7 804 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 BPTFQ12830 3046 aa6.85□□□□□ -1.31
SHQ1-207ENST00000475558 PTPRQQ9UMZ3 2332 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 A0A1B0GVT2 93 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 FAM149AA5PLN7 773 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 OR2AG2A6NM03 316 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 IQCF5A8MTL0 148 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 FOXO6A8MYZ6 492 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 SUPT3HB4E1H0 165 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 PLK4O00444 970 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 RRP8O43159 456 aaKnown RBP6.84□□□□□ -1.31
SHQ1-207ENST00000475558 PCDHGA12O60330 932 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 DFNA5O60443 496 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 SNX3O60493 162 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 UGDHO60701 494 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 CCDC22O60826 627 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 VPS4BO75351 444 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 PSIP1O75475 530 aaKnown RBP6.84□□□□□ -1.31
SHQ1-207ENST00000475558 SUPT3HO75486 399 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 STK16O75716 305 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 DCTN3O75935 186 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 ATP5HO75947 161 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 SUPT7LO94864 414 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 OTCP00480 354 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 CEACAM5P06731 702 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 PRSS56P0CW18 603 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 FGF3P11487 239 aaPredicted RBP6.84□□□□□ -1.31
SHQ1-207ENST00000475558 CDK4P11802 303 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 EPB42P16452 691 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 BGNP21810 368 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 DRD4P21917 467 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 ADSLP30566 484 aaPredicted RBP6.84□□□□□ -1.31
SHQ1-207ENST00000475558 CSNK1EP49674 416 aaKnown RBP6.84□□□□□ -1.31
SHQ1-207ENST00000475558 MMP16P51512 607 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 METAP1P53582 386 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 IRF9Q00978 393 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 OCRLQ01968 901 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 PCDH1Q08174 1060 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 DLG1Q12959 904 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 IRF4Q15306 451 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 PFKFB4Q16877 469 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 KIF19Q2TAC6 998 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 PYCR3Q53H96 274 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 ACSBG2Q5FVE4 666 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 SPDYAQ5MJ70 313 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 ZNF678Q5SXM1 525 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 ENPP7Q6UWV6 458 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 ABRAXAS1Q6UWZ7 409 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 DET1Q7L5Y6 550 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 SPATA21Q7Z572 469 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 ABI3BPQ7Z7G0 1075 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 ZNF605Q86T29 641 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 FAM124AQ86V42 546 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 MARCH9Q86YJ5 346 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 RBM12BQ8IXT5 1001 aaKnown RBP6.84□□□□□ -1.31
SHQ1-207ENST00000475558 CCNYL1Q8N7R7 359 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 TMEM145Q8NBT3 493 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 CCT6BQ92526 530 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 ATP6V1E2Q96A05 226 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 NXPE2Q96DL1 559 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 CRELD1Q96HD1 420 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 BMFQ96LC9 184 aa6.84□□□□□ -1.31
SHQ1-207ENST00000475558 MIPEPQ99797 713 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms