RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 TM4SF4P48230 202 aa17.33■□□□□ 0.37
CCM2-207ENST00000475551 VEGFBP49765 207 aa17.33■□□□□ 0.37
CCM2-207ENST00000475551 MRPS15P82914 257 aaKnown RBP17.33■□□□□ 0.37
CCM2-207ENST00000475551 LAPTM4AQ15012 233 aa17.33■□□□□ 0.37
CCM2-207ENST00000475551 TAF1CQ15572 869 aaPredicted RBP17.33■□□□□ 0.37
CCM2-207ENST00000475551 SMU1Q2TAY7 513 aa17.33■□□□□ 0.37
CCM2-207ENST00000475551 ZFP69Q49AA0 526 aa17.33■□□□□ 0.37
CCM2-207ENST00000475551 CCDC71Q8IV32 467 aaPredicted RBP17.33■□□□□ 0.37
CCM2-207ENST00000475551 DNAJB8Q8NHS0 232 aa17.33■□□□□ 0.37
CCM2-207ENST00000475551 FAM120BQ96EK7 910 aaKnown RBP17.33■□□□□ 0.37
CCM2-207ENST00000475551 E9PQ18 207 aa17.33■□□□□ 0.36
CCM2-207ENST00000475551 SLC2A4P14672 509 aa17.33■□□□□ 0.36
CCM2-207ENST00000475551 ELP6Q0PNE2 266 aa17.33■□□□□ 0.36
CCM2-207ENST00000475551 PTGR1Q14914 329 aa17.33■□□□□ 0.36
CCM2-207ENST00000475551 ABRAXAS2Q15018 415 aa17.33■□□□□ 0.36
CCM2-207ENST00000475551 TIGD6Q17RP2 521 aa17.33■□□□□ 0.36
CCM2-207ENST00000475551 SPANXN4Q5MJ08 99 aa17.33■□□□□ 0.36
CCM2-207ENST00000475551 APH1BQ8WW43 257 aa17.33■□□□□ 0.36
CCM2-207ENST00000475551 C1orf74Q96LT6 269 aa17.33■□□□□ 0.36
CCM2-207ENST00000475551 CCDC32Q9BV29 185 aa17.33■□□□□ 0.36
CCM2-207ENST00000475551 DPY30Q9C005 99 aa17.33■□□□□ 0.36
CCM2-207ENST00000475551 IL1RAPQ9NPH3 570 aa17.33■□□□□ 0.36
CCM2-207ENST00000475551 RASSF1Q9NS23 344 aa17.33■□□□□ 0.36
CCM2-207ENST00000475551 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.33■□□□□ 0.36
CCM2-207ENST00000475551 SAMD4AQ9UPU9 718 aaKnown RBP17.33■□□□□ 0.36
CCM2-207ENST00000475551 PCDHGA12O60330 932 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 NDUFS3O75489 264 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 MOCS2O96007 188 aaPredicted RBP17.32■□□□□ 0.36
CCM2-207ENST00000475551 EPOP01588 193 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 HOXD11P31277 338 aaPredicted RBP17.32■□□□□ 0.36
CCM2-207ENST00000475551 ARL1P40616 181 aaPredicted RBP17.32■□□□□ 0.36
CCM2-207ENST00000475551 LIMK1P53667 647 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 RPL38P63173 70 aaKnown RBP17.32■□□□□ 0.36
CCM2-207ENST00000475551 MAD2L1Q13257 205 aaPredicted RBP17.32■□□□□ 0.36
CCM2-207ENST00000475551 GTF2H3Q13889 308 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 GTDC1Q4AE62 458 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 OR4F6Q8NGB9 312 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 PSMG2Q969U7 264 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 ST6GAL2Q96JF0 529 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 DEPDC7Q96QD5 511 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 CPPED1Q9BRF8 314 aaPredicted RBP17.32■□□□□ 0.36
CCM2-207ENST00000475551 COPS4Q9BT78 406 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 ABCG2Q9UNQ0 655 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 CARD8Q9Y2G2 431 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 ARVCFO00192 962 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 CAPN5O15484 640 aaPredicted RBP17.32■□□□□ 0.36
CCM2-207ENST00000475551 ITGB6P18564 788 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 PCSK1P29120 753 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 EPHA2P29317 976 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 GNG2P59768 71 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 RACK1P63244 317 aaKnown RBP17.32■□□□□ 0.36
CCM2-207ENST00000475551 PCBP2Q15366 365 aaKnown RBP eCLIP17.32■□□□□ 0.36
CCM2-207ENST00000475551 SPANXN2Q5MJ10 180 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 CCDC190Q86UF4 302 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 DNASE1L2Q92874 299 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 UBE2FQ969M7 185 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 CLMPQ9H6B4 373 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 NUDT4Q9NZJ9 180 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 CPA4Q9UI42 421 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 LYVE1Q9Y5Y7 322 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 GBF1Q92538 1859 aa17.32■□□□□ 0.36
CCM2-207ENST00000475551 EIF3FO00303 357 aaPredicted RBP17.31■□□□□ 0.36
CCM2-207ENST00000475551 OR7A17O14581 309 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 CA12O43570 354 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 VPS26AO75436 327 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 ERN1O75460 977 aaKnown RBP17.31■□□□□ 0.36
CCM2-207ENST00000475551 RHOQP17081 205 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 CD9P21926 228 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 IL2P60568 153 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 CREMQ03060 361 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 STARD3Q14849 445 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 DDR2Q16832 855 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 CCDC58Q4VC31 144 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 GOLGA7Q7Z5G4 137 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 ENTHD1Q8IYW4 607 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 OR10Q1Q8NGQ4 319 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 TMEM40Q8WWA1 233 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 SDHCQ99643 169 aaPredicted RBP17.31■□□□□ 0.36
CCM2-207ENST00000475551 MROH8Q9H579 483 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 SLA2Q9H6Q3 261 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 KRT84Q9NSB2 600 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 NLE1Q9NVX2 485 aaPredicted RBP17.31■□□□□ 0.36
CCM2-207ENST00000475551 PDP1Q9P0J1 537 aaPredicted RBP17.31■□□□□ 0.36
CCM2-207ENST00000475551 CACNG4Q9UBN1 327 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 MAU2Q9Y6X3 613 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 PER2O15055 1255 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 SSX4O60224 188 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 CCNDBP1O95273 360 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 UGT2B15P54855 530 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 RPP38P78345 283 aaKnown RBP17.31■□□□□ 0.36
CCM2-207ENST00000475551 GPR50Q13585 617 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 PTPRNQ16849 979 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 ZCCHC8Q6NZY4 707 aaKnown RBP17.31■□□□□ 0.36
CCM2-207ENST00000475551 AFTPHQ6ULP2 937 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.31■□□□□ 0.36
CCM2-207ENST00000475551 GATAD2AQ86YP4 633 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 GALNT12Q8IXK2 581 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 CARNMT1Q8N4J0 409 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 SCAMP5Q8TAC9 235 aa17.31■□□□□ 0.36
CCM2-207ENST00000475551 EEF1AKMT1Q8WVE0 214 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms