RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 AFTPHQ6ULP2 937 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 TAX1BP1Q86VP1 789 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 ATCAYQ86WG3 371 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 GALNT11Q8NCW6 608 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 OR2Y1Q8NGV0 311 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 OR6P1Q8NGX9 317 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 CFAP61Q8NHU2 1237 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 DENND1AQ8TEH3 1009 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.75□□□□□ -1.33
HDAC3-207ENST00000475549 INPP5DQ92835 1189 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 MFSD3Q96ES6 412 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 ZNF285Q96NJ3 590 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 BIRC8Q96P09 236 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 ALS2CR12Q96Q35 445 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 CARD6Q9BX69 1037 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 ZNF552Q9H707 407 aaPredicted RBP6.75□□□□□ -1.33
HDAC3-207ENST00000475549 SYNPO2LQ9H987 977 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 ENAMQ9NRM1 1142 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 P4HTMQ9NXG6 502 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 EURLQ9NYK6 297 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 GALPQ9UBC7 116 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 GUCA1BQ9UMX6 200 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 PLCL2Q9UPR0 1127 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 RUVBL2Q9Y230 463 aaKnown RBP6.75□□□□□ -1.33
HDAC3-207ENST00000475549 PTRH2Q9Y3E5 179 aaKnown RBP6.75□□□□□ -1.33
HDAC3-207ENST00000475549 NFS1Q9Y697 457 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 AP1M2Q9Y6Q5 423 aa6.75□□□□□ -1.33
HDAC3-207ENST00000475549 LOC105369274A0A096LPK9 316 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 LOC102723532A0A0G2JNH3 316 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 A0A1W2PPV9 198 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 TCRBV7S3A2A0A539 114 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 C9J4A7 227 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 GOLGA8KD6RF30 607 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 E7EVH7 732 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 GOLGA8TH3BQL2 631 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 PRMT5O14744 637 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-207ENST00000475549 CD3EAPO15446 510 aaKnown RBP6.74□□□□□ -1.33
HDAC3-207ENST00000475549 MAP3K7O43318 606 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 VPS4BO75351 444 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 AVILO75366 819 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 C1orf105O95561 183 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 F7P08709 466 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-207ENST00000475549 ALAS2P22557 587 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 KCNJ1P48048 391 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 SOX8P57073 446 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 SESN2P58004 480 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-207ENST00000475549 FASTKQ14296 549 aaKnown RBP6.74□□□□□ -1.33
HDAC3-207ENST00000475549 CCNG2Q16589 344 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 EIF2S3LQ2VIR3 472 aaKnown RBP6.74□□□□□ -1.33
HDAC3-207ENST00000475549 SYTL3Q4VX76 610 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 FASTKD1Q53R41 847 aaKnown RBP6.74□□□□□ -1.33
HDAC3-207ENST00000475549 PCID2Q5JVF3 399 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 CTSL3PQ5NE16 218 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 FBXO42Q6P3S6 717 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 DRICH1Q6PGQ1 229 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-207ENST00000475549 CES3Q6UWW8 571 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 IGFL3Q6UXB1 125 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 PPP1R21Q6ZMI0 780 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 COX15Q7KZN9 410 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 NLRP9Q7RTR0 991 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 GPR135Q8IZ08 494 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 OR4N4Q8N0Y3 316 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 GALNT16Q8N428 558 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 AMER2Q8N7J2 671 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 OR2L8Q8NGY9 312 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 PROKR1Q8TCW9 393 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 ASZ1Q8WWH4 475 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 PEX13Q92968 403 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 PNPLA2Q96AD5 504 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 PTERQ96BW5 349 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 LRRC45Q96CN5 670 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 SNRNP40Q96DI7 357 aaKnown RBP6.74□□□□□ -1.33
HDAC3-207ENST00000475549 BARD1Q99728 777 aaKnown RBP6.74□□□□□ -1.33
HDAC3-207ENST00000475549 TRIM56Q9BRZ2 755 aaKnown RBP6.74□□□□□ -1.33
HDAC3-207ENST00000475549 DHRS4Q9BTZ2 278 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 FRMD8P1Q9BZ68 369 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-207ENST00000475549 SLC7A5P2Q9GIP4 190 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 ASF1BQ9NVP2 202 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 GPR83Q9NYM4 423 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 STOX2Q9P2F5 926 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-207ENST00000475549 IFT80Q9P2H3 777 aaPredicted RBP6.74□□□□□ -1.33
HDAC3-207ENST00000475549 VPS4AQ9UN37 437 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 DRG1Q9Y295 367 aaKnown RBP6.74□□□□□ -1.33
HDAC3-207ENST00000475549 ZNF451Q9Y4E5 1061 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 PCDHGB7Q9Y5F8 929 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 CSAG2Q9Y5P2 127 aa6.74□□□□□ -1.33
HDAC3-207ENST00000475549 UNC79Q9P2D8 2635 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 DOPEY2Q9Y3R5 2298 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 FITM1A5D6W6 292 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 WIPF3A6NGB9 483 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 VSTM2BA6NLU5 285 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 SOCS6O14544 535 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 RASGRF2O14827 1237 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 DPM1O60762 260 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 ALOX12BO75342 701 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 VAPBO95292 243 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 MATN4O95460 622 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 CBX6O95503 412 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 APOA4P06727 396 aa6.73□□□□□ -1.33
HDAC3-207ENST00000475549 RPS3P23396 243 aaKnown RBP eCLIP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms