RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 MOCS3O95396 460 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 JUNP05412 331 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 CHRM5P08912 532 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 ZDHHC11BP0C7U3 371 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 COX4I1P13073 169 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 IL2RBP14784 551 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 ZNF30P17039 623 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 ZNF8P17098 575 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 PTAFRP25105 342 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 IL1R2P27930 398 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 GJA4P35212 333 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 WNT5AP41221 380 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 CCR9P51686 369 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 AGFG1P52594 562 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 PRKAA2P54646 552 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 EPHA5P54756 1037 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 BCAR1P56945 870 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 RBP5P82980 135 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 RGS1Q08116 209 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 LMAN2Q12907 356 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 TNK1Q13470 666 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 ANGPT1Q15389 498 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 DUSP6Q16828 381 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 ALG11Q2TAA5 492 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 PDZK1Q5T2W1 519 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 MANEALQ5VSG8 457 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 AFMIDQ63HM1 303 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 LRRC66Q68CR7 880 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 WDR59Q6PJI9 974 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 LMBR1LQ6UX01 489 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 ZNF782Q6ZMW2 699 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 SYDE1Q6ZW31 735 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 GALNTL5Q7Z4T8 443 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 SNX20Q7Z614 316 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 PLEKHH3Q7Z736 793 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 DPPA2Q7Z7J5 298 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 TPRA1Q86W33 373 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 CARM1Q86X55 608 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 CCDC60Q8IWA6 550 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 MB21D1Q8N884 522 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 ABHD11Q8NFV4 315 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 ST7LQ8TDW4 575 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 HTR3CQ8WXA8 447 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 LRTOMTQ8WZ04 291 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 FUBP1Q96AE4 644 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 TMEM41AQ96HV5 264 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 RNF170Q96K19 258 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 C10orf90Q96M02 699 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 OR5M11Q96RB7 305 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 BDH2Q9BUT1 245 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 BTBD1Q9H0C5 482 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 KCNH6Q9H252 994 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 ABCC13Q9NSE7 274 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 IMPAD1Q9NX62 359 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 CDH22Q9UJ99 828 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 TMPRSS11EQ9UL52 423 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 XDHP47989 1333 aa5.86□□□□□ -1.47
ECHDC1-215ENST00000475319 NRKQ7Z2Y5 1582 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 MYH7BA7E2Y1 1941 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 UBA6A0AVT1 1052 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 HMX2A2RU54 273 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 RGSL1A5PLK6 1076 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 EFCAB7A8K855 629 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 KRBOX1C9JBD0 128 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 CDC7O00311 574 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 DCLK1O15075 740 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 INPPL1O15357 1258 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 STX7O15400 261 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 PRPF4O43172 522 aaKnown RBP eCLIP5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 HTRA2O43464 458 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 JAK2O60674 1132 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 UPK1BO75841 260 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 TTLL1O95922 423 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 BMP15O95972 392 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 IL1BP01584 269 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 AMHP03971 560 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 DNTTP04053 509 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 GALTP07902 379 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 SBK2P0C263 348 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 CYP2D6P10635 497 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 MYCLP12524 364 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 JUPP14923 745 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 TNNI3P19429 210 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 TCN1P20061 433 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 ABCB4P21439 1286 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 TNFSF4P23510 183 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 ATP5F1P24539 256 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 MAPK3P27361 379 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 GABRB3P28472 473 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 CRABP1P29762 137 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 CXCR5P32302 372 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 PCGF2P35227 344 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 PPM1AP35813 382 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 GPX4P36969 197 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 CPA2P48052 419 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 GNG10P50151 68 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 CLCN5P51795 746 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 PPARDQ03181 441 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 GRIK2Q13002 908 aa5.85□□□□□ -1.47
ECHDC1-215ENST00000475319 PPIL2Q13356 520 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms