RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 CSE1LP55060 971 aaKnown RBP2.32□□□□□ -2.04
CALD1-216ENST00000473714 CLDN6P56747 220 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 RIPK4P57078 832 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 GSTO1P78417 241 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 NTHL1P78549 312 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 GABPAQ06546 454 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 TFCP2Q12800 502 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 BFSP1Q12934 665 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 NAE1Q13564 534 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 FHL1Q13642 323 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 SNTB1Q13884 538 aaKnown RBP2.32□□□□□ -2.04
CALD1-216ENST00000473714 NEDD9Q14511 834 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 ADIPOQQ15848 244 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 SYTL3Q4VX76 610 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 CCDC92Q53HC0 331 aaPredicted RBP2.32□□□□□ -2.04
CALD1-216ENST00000473714 SPDYCQ5MJ68 293 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 TTC39AQ5SRH9 613 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 ERMARDQ5T6L9 678 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 C6orf163Q5TEZ5 329 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 VWA5B1Q5TIE3 1220 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 PRAMEF17Q5VTA0 474 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 TXNDC8Q6A555 127 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 SIGIRRQ6IA17 410 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 MIS18BP1Q6P0N0 1132 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 ZNF474Q6S9Z5 364 aaPredicted RBP2.32□□□□□ -2.04
CALD1-216ENST00000473714 IL27RAQ6UWB1 636 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 RABEPKQ7Z6M1 372 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 TFAP2DQ7Z6R9 452 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 ADGRA1Q86SQ6 560 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 HAPLN4Q86UW8 402 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 CAMK1DQ8IU85 385 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 EPHX4Q8IUS5 362 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 MFN1Q8IWA4 741 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 UNC45BQ8IWX7 931 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 MCEMP1Q8IX19 187 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 FAM217AQ8IXS0 508 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 CADM3Q8N126 398 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 NUP93Q8N1F7 819 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 PARP16Q8N5Y8 322 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 NKAIN3Q8N8D7 197 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 OR14L1PQ8NHC6 308 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 HUS1BQ8NHY5 278 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 KIF18AQ8NI77 898 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 KCNE4Q8WWG9 221 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 FGF13Q92913 245 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 ELSPBP1Q96BH3 223 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 FBXL8Q96CD0 374 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 TMCO6Q96DC7 493 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 CFAP53Q96M91 514 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 LZTS2Q9BRK4 669 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 PCGF1Q9BSM1 259 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 EFHD1Q9BUP0 239 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 THUMPD3Q9BV44 507 aaKnown RBP2.32□□□□□ -2.04
CALD1-216ENST00000473714 MRPL1Q9BYD6 325 aaKnown RBP2.32□□□□□ -2.04
CALD1-216ENST00000473714 EDEM3Q9BZQ6 932 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 TMEM245Q9H330 911 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 OPA3Q9H6K4 179 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 XAB2Q9HCS7 855 aaKnown RBP2.32□□□□□ -2.04
CALD1-216ENST00000473714 CHMP1AQ9HD42 196 aaPredicted RBP2.32□□□□□ -2.04
CALD1-216ENST00000473714 RNF146Q9NTX7 359 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 ABCF3Q9NUQ8 709 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 SETD4Q9NVD3 440 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 ASB6Q9NWX5 421 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 GAR1Q9NY12 217 aaKnown RBP2.32□□□□□ -2.04
CALD1-216ENST00000473714 CYP39A1Q9NYL5 469 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 MARCH4Q9P2E8 410 aaPredicted RBP2.32□□□□□ -2.04
CALD1-216ENST00000473714 PILRBQ9UKJ0 227 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 ISY1Q9ULR0 285 aaKnown RBP2.32□□□□□ -2.04
CALD1-216ENST00000473714 LAMP3Q9UQV4 416 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 ENTPD4Q9Y227 616 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 PAM16Q9Y3D7 125 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 CEPT1Q9Y6K0 416 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 SLC4A4Q9Y6R1 1079 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 PDS5AQ29RF7 1337 aaKnown RBP2.32□□□□□ -2.04
CALD1-216ENST00000473714 TMEM131Q92545 1883 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 COL1A2P08123 1366 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 BAZ2AQ9UIF9 1905 aaKnown RBP2.32□□□□□ -2.04
CALD1-216ENST00000473714 CUBNO60494 3623 aa2.32□□□□□ -2.04
CALD1-216ENST00000473714 GREB1LQ9C091 1923 aaPredicted RBP2.31□□□□□ -2.04
CALD1-216ENST00000473714 A0A0A0MQY5 61 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.31□□□□□ -2.04
CALD1-216ENST00000473714 TCRBV5S1A1TA0A578 114 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 C1orf226A1L170 272 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 OR2A25A4D2G3 310 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 URADA6NGE7 173 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 SERINC4A6NH21 518 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 LRRC3CA6NJW4 275 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 C17orf100A8MU93 164 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 CDRT15L2A8MXV6 281 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 A8MZ25 164 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 NPIPB11E5RHQ5 1161 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 UBE2CO00762 179 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 OGG1O15527 345 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 MITFO75030 526 aaPredicted RBP2.31□□□□□ -2.04
CALD1-216ENST00000473714 TADA2AO75478 443 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 PSMD10O75832 226 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 RGS11O94810 467 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 ZWINTO95229 277 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 BAG2O95816 211 aa2.31□□□□□ -2.04
CALD1-216ENST00000473714 BAG3O95817 575 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms