RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 CNSTQ6PJW8 725 aa21.74■■□□□ 1.07
PTP4A1-203ENST00000473334 CREG2Q8IUH2 290 aa21.74■■□□□ 1.07
PTP4A1-203ENST00000473334 DENND6AQ8IWF6 608 aa21.74■■□□□ 1.07
PTP4A1-203ENST00000473334 GPR135Q8IZ08 494 aa21.74■■□□□ 1.07
PTP4A1-203ENST00000473334 RAB42Q8N4Z0 105 aa21.74■■□□□ 1.07
PTP4A1-203ENST00000473334 ZBTB2Q8N680 514 aa21.74■■□□□ 1.07
PTP4A1-203ENST00000473334 CALML6Q8TD86 181 aa21.74■■□□□ 1.07
PTP4A1-203ENST00000473334 APOBEC4Q8WW27 367 aaKnown RBP21.74■■□□□ 1.07
PTP4A1-203ENST00000473334 SEC14L1Q92503 715 aa21.74■■□□□ 1.07
PTP4A1-203ENST00000473334 FAM136AQ96C01 138 aa21.74■■□□□ 1.07
PTP4A1-203ENST00000473334 SLC7A5P2Q9GIP4 190 aa21.74■■□□□ 1.07
PTP4A1-203ENST00000473334 FBXO6Q9NRD1 293 aaPredicted RBP21.74■■□□□ 1.07
PTP4A1-203ENST00000473334 C20orf96Q9NUD7 363 aaPredicted RBP21.74■■□□□ 1.07
PTP4A1-203ENST00000473334 PCMTD2Q9NV79 361 aa21.74■■□□□ 1.07
PTP4A1-203ENST00000473334 TUBD1Q9UJT1 453 aa21.74■■□□□ 1.07
PTP4A1-203ENST00000473334 RUVBL2Q9Y230 463 aaKnown RBP21.74■■□□□ 1.07
PTP4A1-203ENST00000473334 SAR1BQ9Y6B6 198 aa21.74■■□□□ 1.07
PTP4A1-203ENST00000473334 BAHCC1Q9P281 2608 aa21.74■■□□□ 1.07
PTP4A1-203ENST00000473334 HBQ1P09105 142 aa21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 FURINP09958 794 aa21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 SLC1A2P43004 574 aa21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 CTBP1Q13363 440 aa21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 IZUMO3Q5VZ72 239 aa21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 TAX1BP1Q86VP1 789 aa21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 C2orf73Q8N5S3 287 aaPredicted RBP21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 LMNTD1Q8N9Z9 388 aa21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 MAGEC3Q8TD91 643 aa21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 RUNDC3BQ96NL0 473 aa21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 FAM117AQ9C073 453 aa21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 SLC25A18Q9H1K4 315 aa21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 CHST8Q9H2A9 424 aa21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 CCDC68Q9H2F9 335 aa21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 TSR3Q9UJK0 312 aaKnown RBP21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 POLHQ9Y253 713 aa21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 FARSAQ9Y285 508 aaKnown RBP21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 FAM169AQ9Y6X4 670 aa21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 ZNF462Q96JM2 2506 aa21.73■■□□□ 1.07
PTP4A1-203ENST00000473334 CDC14CA4D256 554 aa21.72■■□□□ 1.07
PTP4A1-203ENST00000473334 ZNF749O43361 778 aa21.72■■□□□ 1.07
PTP4A1-203ENST00000473334 MATN4O95460 622 aa21.72■■□□□ 1.07
PTP4A1-203ENST00000473334 PLA2G2AP14555 144 aa21.72■■□□□ 1.07
PTP4A1-203ENST00000473334 PGAM1P18669 254 aa21.72■■□□□ 1.07
PTP4A1-203ENST00000473334 MAGP20916 626 aa21.72■■□□□ 1.07
PTP4A1-203ENST00000473334 RPS18P62269 152 aaKnown RBP21.72■■□□□ 1.07
PTP4A1-203ENST00000473334 CCSMST1Q4G0I0 132 aa21.72■■□□□ 1.07
PTP4A1-203ENST00000473334 SYDE1Q6ZW31 735 aaPredicted RBP21.72■■□□□ 1.07
PTP4A1-203ENST00000473334 SYVN1Q86TM6 617 aa21.72■■□□□ 1.07
PTP4A1-203ENST00000473334 FAM20CQ8IXL6 584 aa21.72■■□□□ 1.07
PTP4A1-203ENST00000473334 KLHL7Q8IXQ5 586 aa21.72■■□□□ 1.07
PTP4A1-203ENST00000473334 SYTL1Q8IYJ3 562 aa21.72■■□□□ 1.07
PTP4A1-203ENST00000473334 FAM167BQ9BTA0 163 aa21.72■■□□□ 1.07
PTP4A1-203ENST00000473334 INTS7Q9NVH2 962 aaKnown RBP21.72■■□□□ 1.07
PTP4A1-203ENST00000473334 GALPQ9UBC7 116 aa21.72■■□□□ 1.07
PTP4A1-203ENST00000473334 BSNQ9UPA5 3926 aa21.72■■□□□ 1.07
PTP4A1-203ENST00000473334 GCN1Q92616 2671 aaKnown RBP21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 H3BMH7 237 aa21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 HCRTR1O43613 425 aa21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 OR2B3O76000 313 aa21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 F7P08709 466 aaPredicted RBP21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 RAB40ALP0C0E4 278 aa21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 CLCN7P51798 805 aa21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 DHX9Q08211 1270 aaKnown RBP21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 CRYMQ14894 314 aa21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 TTLL9Q3SXZ7 439 aa21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 ACSBG2Q5FVE4 666 aa21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 LCN10Q6JVE6 187 aa21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 KCNMB4Q86W47 210 aa21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 DNAJC22Q8N4W6 341 aa21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 HMGCLL1Q8TB92 370 aa21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 SPATA7Q9P0W8 599 aa21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 FBXO5Q9UKT4 447 aa21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 PLCL2Q9UPR0 1127 aa21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 KCNMB2Q9Y691 235 aa21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 AP1M2Q9Y6Q5 423 aa21.71■■□□□ 1.07
PTP4A1-203ENST00000473334 FKBP9O95302 570 aa21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 TTC4O95801 387 aa21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 IVDP26440 423 aa21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 PAFAH1B1P43034 410 aa21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 DR1Q01658 176 aa21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 SF1Q15637 639 aaKnown RBP21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 KLHL38Q2WGJ6 581 aa21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 HSP90AA5PQ58FG0 334 aa21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 ZNF549Q6P9A3 640 aa21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 FAM198BQ6UWH4 519 aa21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 DENND1AQ8TEH3 1009 aa21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 KCNJ9Q92806 393 aa21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 DPH2Q9BQC3 489 aaPredicted RBP21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 NLNQ9BYT8 704 aa21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 SPRTNQ9H040 489 aaPredicted RBP21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 KLHL42Q9P2K6 505 aa21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 KLHL20Q9Y2M5 609 aa21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 HEMK1Q9Y5R4 338 aaPredicted RBP21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 COMMD10Q9Y6G5 202 aa21.7■■□□□ 1.06
PTP4A1-203ENST00000473334 TLN1Q9Y490 2541 aaKnown RBP21.69■■□□□ 1.06
PTP4A1-203ENST00000473334 KRT87PA6NCN2 255 aa21.69■■□□□ 1.06
PTP4A1-203ENST00000473334 CCDC188H7C350 402 aa21.69■■□□□ 1.06
PTP4A1-203ENST00000473334 ZSCAN9O15535 394 aaPredicted RBP21.69■■□□□ 1.06
PTP4A1-203ENST00000473334 PRICKLE3O43900 615 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms