RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 BARD1Q99728 777 aaKnown RBP20.62■□□□□ 0.89
COL18A1-207ENST00000473212 WDR12Q9GZL7 423 aaKnown RBP20.62■□□□□ 0.89
COL18A1-207ENST00000473212 TRIT1Q9H3H1 467 aaKnown RBP20.62■□□□□ 0.89
COL18A1-207ENST00000473212 ASB8Q9H765 288 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 WWOXQ9NZC7 414 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 SLC28A1O00337 649 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 DNAJB5O75953 348 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 GLUD1P00367 558 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 MYCLP1P12525 358 aaPredicted RBP20.61■□□□□ 0.89
COL18A1-207ENST00000473212 HALP42357 657 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 KPNA1P52294 538 aaPredicted RBP20.61■□□□□ 0.89
COL18A1-207ENST00000473212 SIM2Q14190 667 aaPredicted RBP20.61■□□□□ 0.89
COL18A1-207ENST00000473212 ADPRMQ3LIE5 342 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 HECTD3Q5T447 861 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 CES5AQ6NT32 575 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 LRRC8DQ7L1W4 858 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 CHPFQ8IZ52 775 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 CLPBQ9H078 707 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 MAGIXQ9H6Y5 334 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 OPTCQ9UBM4 332 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 INTS6Q9UL03 887 aaKnown RBP20.61■□□□□ 0.89
COL18A1-207ENST00000473212 TRBV5-3A0A0A0MS03 114 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 GABARAPO95166 117 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 CLDN7O95471 211 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 IFITM3Q01628 133 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 GALNT10Q86SR1 603 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 HIPK1Q86Z02 1210 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 RORBQ92753 470 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 GLMNQ92990 594 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 INPP5KQ9BT40 448 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 TMEM161AQ9NX61 479 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 DLGAP4Q9Y2H0 992 aa20.61■□□□□ 0.89
COL18A1-207ENST00000473212 M0R3G1 203 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 FZD6O60353 706 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 TBL1XO60907 577 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 HMGA1P17096 107 aaKnown RBP20.6■□□□□ 0.89
COL18A1-207ENST00000473212 IGFBP5P24593 272 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 HMGCLP35914 325 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 NEK2P51955 445 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 GPNMBQ14956 572 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 CPSF6Q16630 551 aaKnown RBP eCLIP20.6■□□□□ 0.89
COL18A1-207ENST00000473212 ADGRF1Q5T601 910 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 ATG9BQ674R7 924 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 CYP4Z1Q86W10 505 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 PYURFQ96I23 114 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 TTLL2Q9BWV7 592 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 FAM126AQ9BYI3 521 aaPredicted RBP20.6■□□□□ 0.89
COL18A1-207ENST00000473212 CD244Q9BZW8 370 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 RIBC2Q9H4K1 309 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 C1orf109Q9NX04 203 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 OARD1Q9Y530 152 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 UPK3BL1B0FP48 263 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 FAM220BPB1ANY3 271 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 UPK3BL2E5RIL1 263 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 NBNO60934 754 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 VBP1P61758 197 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 NKX3-2P78367 333 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 SLC14A1Q13336 389 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 PLD1Q13393 1074 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 NPTX1Q15818 432 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 CCDC81Q6ZN84 652 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 B3GNT8Q7Z7M8 397 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 CALHM3Q86XJ0 350 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 FBLIM1Q8WUP2 373 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 ALOXE3Q9BYJ1 711 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 PCDH12Q9NPG4 1184 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 IL26Q9NPH9 171 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 VPS51Q9UID3 782 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 TRIM17Q9Y577 477 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 PCDHB1Q9Y5F3 818 aa20.6■□□□□ 0.89
COL18A1-207ENST00000473212 TRIM43BA6NCK2 446 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 COQ9O75208 318 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 JRKO75564 520 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 NADKO95544 446 aaPredicted RBP20.59■□□□□ 0.89
COL18A1-207ENST00000473212 GALTP07902 379 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 BCKDHAP12694 445 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 CD6P30203 668 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 EIF2B2P49770 351 aaKnown RBP20.59■□□□□ 0.89
COL18A1-207ENST00000473212 GZMMP51124 257 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 FCGRTP55899 365 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 ZXDBP98169 803 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 IL18R1Q13478 541 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 ZXDCQ2QGD7 858 aaPredicted RBP20.59■□□□□ 0.89
COL18A1-207ENST00000473212 RFX4Q33E94 735 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 USP39Q53GS9 565 aaKnown RBP20.59■□□□□ 0.89
COL18A1-207ENST00000473212 LAIR1Q6GTX8 287 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 ZNF551Q7Z340 670 aaPredicted RBP20.59■□□□□ 0.89
COL18A1-207ENST00000473212 SAPCD2Q86UD0 394 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 RNF175Q8N4F7 328 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 PIK3C3Q8NEB9 887 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 PIH1D2Q8WWB5 315 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 ZNF566Q969W8 418 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 VMP1Q96GC9 406 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 CPPED1Q9BRF8 314 aaPredicted RBP20.59■□□□□ 0.89
COL18A1-207ENST00000473212 TTPALQ9BTX7 342 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 ATAD3AQ9NVI7 634 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 MBD1Q9UIS9 605 aaPredicted RBP20.59■□□□□ 0.89
COL18A1-207ENST00000473212 MANBAO00462 879 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 TACR1P25103 407 aa20.59■□□□□ 0.89
COL18A1-207ENST00000473212 CSKP41240 450 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms