RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 C2orf73Q8N5S3 287 aaPredicted RBP12.7□□□□□ -0.38
TPM3-216ENST00000473036 FBF1Q8TES7 1133 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 EEF1AKMT1Q8WVE0 214 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 INPP5DQ92835 1189 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 RNF31Q96EP0 1072 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 SRMSQ9H3Y6 488 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 ZNF768Q9H5H4 540 aaKnown RBP12.7□□□□□ -0.38
TPM3-216ENST00000473036 ZFATQ9P243 1243 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 KLHL42Q9P2K6 505 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.7□□□□□ -0.38
TPM3-216ENST00000473036 ADAMTS6Q9UKP5 1117 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 POMT2Q9UKY4 750 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 COMMD10Q9Y6G5 202 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 V9GYY5 206 aaPredicted RBP12.7□□□□□ -0.38
TPM3-216ENST00000473036 PCM1Q15154 2024 aa12.7□□□□□ -0.38
TPM3-216ENST00000473036 EFCAB7A8K855 629 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 PRICKLE3O43900 615 aaPredicted RBP12.69□□□□□ -0.38
TPM3-216ENST00000473036 PSIP1O75475 530 aaKnown RBP12.69□□□□□ -0.38
TPM3-216ENST00000473036 MYBL2P10244 700 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 CD9P21926 228 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 PRDX3P30048 256 aaKnown RBP12.69□□□□□ -0.38
TPM3-216ENST00000473036 PHBP35232 272 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 GMPRP36959 345 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 TAS2R39P59534 338 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 VSNL1P62760 191 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 YBX1P67809 324 aaKnown RBP12.69□□□□□ -0.38
TPM3-216ENST00000473036 KCNC4Q03721 635 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 EIF3IQ13347 325 aaKnown RBP12.69□□□□□ -0.38
TPM3-216ENST00000473036 KCNAB1Q14722 419 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 KBTBD12Q3ZCT8 623 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 CACHD1Q5VU97 1274 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 CLEC14AQ86T13 490 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 TRIM73Q86UV7 250 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 SLC26A11Q86WA9 606 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 OOSP2Q86WS3 158 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 CEP97Q8IW35 865 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 DCUN1D3Q8IWE4 304 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 AGBL5Q8NDL9 886 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 KCNE4Q8WWG9 221 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 ASB11Q8WXH4 323 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 USP7Q93009 1102 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 CAVIN3Q969G5 261 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 MED8Q96G25 268 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 OR2A14Q96R47 310 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 CMKLR1Q99788 373 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 CCDC77Q9BR77 488 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 ZMYND15Q9H091 742 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 CDC42EP4Q9H3Q1 356 aaKnown RBP12.69□□□□□ -0.38
TPM3-216ENST00000473036 MTO1Q9Y2Z2 717 aaKnown RBP12.69□□□□□ -0.38
TPM3-216ENST00000473036 VWA7Q9Y334 891 aa12.69□□□□□ -0.38
TPM3-216ENST00000473036 FAM95CA0A1B0GW59 222 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 A0A1W2PPV9 198 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 GFYI3L273 518 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 RASGRF2O14827 1237 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 HCRTR1O43613 425 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 VPS26AO75436 327 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 ITGA2BP08514 1039 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 CHRM5P08912 532 aaPredicted RBP12.68□□□□□ -0.38
TPM3-216ENST00000473036 FAM153BP0C7A2 387 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 MPC1LP0DKB6 136 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 PVRP15151 417 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 FOLR1P15328 257 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 ST6GAL1P15907 406 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 SLC5A2P31639 672 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 RAB28P51157 221 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 MAPK10P53779 464 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 MC2RQ01718 297 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 FASTKQ14296 549 aaKnown RBP12.68□□□□□ -0.38
TPM3-216ENST00000473036 ZIC1Q15915 447 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 ZXDCQ2QGD7 858 aaPredicted RBP12.68□□□□□ -0.38
TPM3-216ENST00000473036 FAM153CQ494X1 144 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 ANKS6Q68DC2 871 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 NEK10Q6ZWH5 1172 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 GSPT2Q8IYD1 628 aaKnown RBP12.68□□□□□ -0.38
TPM3-216ENST00000473036 GPATCH11Q8N954 259 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 SKA2Q8WVK7 121 aaPredicted RBP12.68□□□□□ -0.38
TPM3-216ENST00000473036 TTC9Q92623 222 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 ZDHHC12Q96GR4 267 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 SLC41A2Q96JW4 573 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 CTRCQ99895 268 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 PITPNM3Q9BZ71 974 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 SPRY4Q9C004 299 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 KLHL25Q9H0H3 589 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 CCDC68Q9H2F9 335 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 RHOJQ9H4E5 214 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 CAB39LQ9H9S4 337 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 ACTR10Q9NZ32 417 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 POLG2Q9UHN1 485 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 B3GALT1Q9Y5Z6 326 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 BOD1L1Q8NFC6 3051 aa12.68□□□□□ -0.38
TPM3-216ENST00000473036 UBR5O95071 2799 aaPredicted RBP12.67□□□□□ -0.38
TPM3-216ENST00000473036 HEATR5BQ9P2D3 2071 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 HMX2A2RU54 273 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 GSAPA4D1B5 854 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 TLCD2A6NGC4 264 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 SLC9B1P1A6NJY1 282 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 B4E171 279 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 MYO1CO00159 1063 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 TOX3O15405 576 aaPredicted RBP12.67□□□□□ -0.38
TPM3-216ENST00000473036 RASSF9O75901 435 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms