RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 DNASE1L2Q92874 299 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 C19orf60Q96EN9 201 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 ST6GAL2Q96JF0 529 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 SPATA17Q96L03 361 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 TRMT61BQ9BVS5 477 aaKnown RBP9.88□□□□□ -0.83
APTX-216ENST00000472896 UGT2B28Q9BY64 529 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 DUSP21Q9H596 190 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 IL1RL2Q9HB29 575 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 ZNF334Q9HCZ1 680 aaPredicted RBP9.88□□□□□ -0.83
APTX-216ENST00000472896 DNAJB9Q9UBS3 223 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 MOSPD1Q9UJG1 213 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 GPSM3Q9Y4H4 160 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 USP3Q9Y6I4 520 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 LOC100130705A0A1B0GUX0 176 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 A0A1W2PP18 115 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 SNTNA6NMZ2 147 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 EFCAB9A8MZ26 197 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 AXIN1O15169 862 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 DFNA5O60443 496 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 SNX2O60749 519 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 PROS1P07225 676 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 ITGAMP11215 1152 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 HNRNPLP14866 589 aaKnown RBP eCLIP9.88□□□□□ -0.83
APTX-216ENST00000472896 ATICP31939 592 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 SCNN1AP37088 669 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 VIPR2P41587 438 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 POU5F1BQ06416 359 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 CDK5R2Q13319 367 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 NFYCQ13952 458 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 PCBP1Q15365 356 aaKnown RBP eCLIP9.88□□□□□ -0.83
APTX-216ENST00000472896 FAM83EQ2M2I3 478 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 TECRLQ5HYJ1 363 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 TPRG1LQ5T0D9 272 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 AGAP9Q5VTM2 703 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 LAIR2Q6ISS4 152 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 SLC27A1Q6PCB7 646 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 BLOC1S3Q6QNY0 202 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 VITQ6UXI7 678 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 ZNF438Q7Z4V0 828 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 SPATA19Q7Z5L4 167 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 NOXA1Q86UR1 476 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 FAM35AQ86V20 835 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 LIX1LQ8IVB5 337 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 SLC41A1Q8IVJ1 513 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 DNAAF3Q8N9W5 541 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 ACVR1CQ8NER5 493 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 SLC2A14Q8TDB8 520 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 BLOC1S5Q8TDH9 187 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 GIPC2Q8TF65 315 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 TMCO6Q96DC7 493 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 SLC39A13Q96H72 371 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 KCTD15Q96SI1 283 aaPredicted RBP9.88□□□□□ -0.83
APTX-216ENST00000472896 ZNF717Q9BY31 904 aaPredicted RBP9.88□□□□□ -0.83
APTX-216ENST00000472896 ALOXE3Q9BYJ1 711 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 ELOVL4Q9GZR5 314 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 DCSTAMPQ9H295 470 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 ZFP14Q9HCL3 533 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 SDR39U1Q9NRG7 319 aaPredicted RBP9.88□□□□□ -0.83
APTX-216ENST00000472896 ACOXLQ9NUZ1 547 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 COMMD8Q9NX08 183 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 LEF1Q9UJU2 399 aaPredicted RBP9.88□□□□□ -0.83
APTX-216ENST00000472896 CPSF3Q9UKF6 684 aaKnown RBP9.88□□□□□ -0.83
APTX-216ENST00000472896 FIS1Q9Y3D6 152 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 PCDHGA10Q9Y5H3 936 aa9.88□□□□□ -0.83
APTX-216ENST00000472896 OAS3Q9Y6K5 1087 aaKnown RBP9.88□□□□□ -0.83
APTX-216ENST00000472896 COL4A2P08572 1712 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 FAM95CA0A1B0GW59 222 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 FAM92AA1XBS5 289 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 OR5K3A6NET4 321 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 A8MT66 165 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 ERVH48-1M5A8F1 160 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 EEF2KO00418 725 aaKnown RBP9.87□□□□□ -0.83
APTX-216ENST00000472896 ARHGEF9O43307 516 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 MOSPD3O75425 235 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 EEDO75530 441 aaKnown RBP9.87□□□□□ -0.83
APTX-216ENST00000472896 LRIG2O94898 1065 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 FGF4P08620 206 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 ALDOCP09972 364 aaKnown RBP9.87□□□□□ -0.83
APTX-216ENST00000472896 NAGAP17050 411 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 ITGA2P17301 1181 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 LBPP18428 481 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 CYP2A7P20853 494 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 GDI1P31150 447 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 ZNF135P52742 658 aaPredicted RBP9.87□□□□□ -0.83
APTX-216ENST00000472896 NCS1P62166 190 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 TFAMQ00059 246 aaKnown RBP9.87□□□□□ -0.83
APTX-216ENST00000472896 POU4F1Q01851 419 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 EMX2Q04743 252 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 EIF2B5Q13144 721 aaKnown RBP9.87□□□□□ -0.83
APTX-216ENST00000472896 CAPRIN1Q14444 709 aaKnown RBP9.87□□□□□ -0.83
APTX-216ENST00000472896 MXD4Q14582 209 aaPredicted RBP9.87□□□□□ -0.83
APTX-216ENST00000472896 VPS26BQ4G0F5 336 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 IL31Q6EBC2 164 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 GLYATQ6IB77 296 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 ZNF767PQ75MW2 155 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 PID1Q7Z2X4 250 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 RAB43Q86YS6 212 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 PARP16Q8N5Y8 322 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 GALNT6Q8NCL4 622 aa9.87□□□□□ -0.83
APTX-216ENST00000472896 FAM83FQ8NEG4 500 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms