RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 BDKRB1P46663 353 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 OR1D4P47884 311 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 ITIH4Q14624 930 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 NCF4Q15080 339 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 INPP5JQ15735 1006 aaPredicted RBP7.77□□□□□ -1.17
USP48-207ENST00000471752 KYNUQ16719 465 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 PAPD7Q5XG87 772 aaKnown RBP7.77□□□□□ -1.17
USP48-207ENST00000471752 FRMPD2BQ6IN97 320 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 JMJD6Q6NYC1 403 aaPredicted RBP7.77□□□□□ -1.17
USP48-207ENST00000471752 TTC27Q6P3X3 843 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 PPP1R21Q6ZMI0 780 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 PPP1R32Q7Z5V6 425 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 MCATQ8IVS2 390 aaKnown RBP7.77□□□□□ -1.17
USP48-207ENST00000471752 TBC1D21Q8IYX1 336 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 SLC22A15Q8IZD6 547 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 OR4N4Q8N0Y3 316 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 OR8K5Q8NH50 307 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 CPT1CQ8TCG5 803 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 HEXDCQ8WVB3 486 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 MFSD3Q96ES6 412 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 BIRC8Q96P09 236 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 RANBP9Q96S59 729 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 C19orf43Q9BQ61 176 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 FERMT1Q9BQL6 677 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 ANP32EQ9BTT0 268 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 LZTFL1Q9NQ48 299 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 ACSS2Q9NR19 701 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 TREX1Q9NSU2 369 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 SYBUQ9NX95 663 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 FEZ2Q9UHY8 353 aaPredicted RBP7.77□□□□□ -1.17
USP48-207ENST00000471752 SERTAD3Q9UJW9 196 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 TTC7AQ9ULT0 858 aaPredicted RBP7.77□□□□□ -1.17
USP48-207ENST00000471752 NTNG1Q9Y2I2 539 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 PTRH2Q9Y3E5 179 aaKnown RBP7.77□□□□□ -1.17
USP48-207ENST00000471752 MAP4K5Q9Y4K4 846 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 DCHS2Q6V1P9 2916 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 MDC1Q14676 2089 aaKnown RBP7.77□□□□□ -1.17
USP48-207ENST00000471752 A0A0J9YY10 115 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 A0A1W2PPV9 198 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 HEATR9A2RTY3 570 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 KLHL33A6NCF5 533 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 TCP11X1B4DZS4 312 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 PSMD3O43242 534 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 NIPSNAP2O75323 286 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 SLCO2B1O94956 709 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 IPO7O95373 1038 aaKnown RBP7.76□□□□□ -1.17
USP48-207ENST00000471752 FGGP02679 453 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 STATHP02808 62 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 OR56A5P0C7T3 313 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 MSL3P1P0C860 447 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 ALAS2P22557 587 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 FMO4P31512 558 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 STIP1P31948 543 aaKnown RBP7.76□□□□□ -1.17
USP48-207ENST00000471752 FDFT1P37268 417 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 PGDP52209 483 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 EFNA3P52797 238 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 PGGT1BP53609 377 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 GSDMDP57764 484 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 Q0VFX4 171 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 RPS6KA1Q15418 735 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 NKAIN1Q4KMZ8 207 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 SYTL3Q4VX76 610 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 FASTKD1Q53R41 847 aaKnown RBP7.76□□□□□ -1.17
USP48-207ENST00000471752 SLC6A19Q695T7 634 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 RHBDD2Q6NTF9 364 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 MRPL14Q6P1L8 145 aaKnown RBP7.76□□□□□ -1.17
USP48-207ENST00000471752 FBXO42Q6P3S6 717 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 FIGLAQ6QHK4 219 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 TTLL10Q6ZVT0 673 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 COX15Q7KZN9 410 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 MRGPREQ86SM8 312 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 LINC00523Q86TU6 105 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 SYCE1Q8N0S2 351 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 CARFQ8N187 725 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 CISD2Q8N5K1 135 aaKnown RBP7.76□□□□□ -1.17
USP48-207ENST00000471752 RNF10Q8N5U6 811 aaKnown RBP7.76□□□□□ -1.17
USP48-207ENST00000471752 PRELID2Q8N945 189 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 THAP4Q8WY91 577 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 TCTN2Q96GX1 697 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 MS4A14Q96JA4 679 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 CALR3Q96L12 384 aaKnown RBP7.76□□□□□ -1.17
USP48-207ENST00000471752 ALS2CR12Q96Q35 445 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 CARD6Q9BX69 1037 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 ZNF552Q9H707 407 aaPredicted RBP7.76□□□□□ -1.17
USP48-207ENST00000471752 RYDENQ9NUL5 291 aaKnown RBP7.76□□□□□ -1.17
USP48-207ENST00000471752 EURLQ9NYK6 297 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 OR6C2Q9NZP2 312 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 MAU2Q9Y6X3 613 aa7.76□□□□□ -1.17
USP48-207ENST00000471752 POLEQ07864 2286 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 SOCS6O14544 535 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 ZSCAN9O15535 394 aaPredicted RBP7.75□□□□□ -1.17
USP48-207ENST00000471752 WISP2O76076 250 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 VAPBO95292 243 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 C1orf105O95561 183 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 FTH1P02794 183 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 CD9P21926 228 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 CDC25BP30305 580 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 SHMT2P34897 504 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 VPS41P49754 854 aa7.75□□□□□ -1.17
USP48-207ENST00000471752 ST13P50502 369 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms