RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 TRBV5-3A0A0A0MS03 114 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 FADS2P1A8MWK0 482 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 UPK3BL1B0FP48 263 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 UPK3BL2E5RIL1 263 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 SOCS2O14508 198 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 TXNDC9O14530 226 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 AREL1O15033 823 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 ACOX3O15254 700 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 HOXC11O43248 304 aaPredicted RBP6.25□□□□□ -1.41
SPEN-204ENST00000471538 SPINT1O43278 529 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 KIF1CO43896 1103 aaKnown RBP6.25□□□□□ -1.41
SPEN-204ENST00000471538 BNIP3LO60238 219 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 LEFTY1O75610 366 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 SLCO2B1O94956 709 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 AP2A2O94973 939 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 CLDN9O95484 217 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 STAMBPO95630 424 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 CA3P07451 260 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 SRPRAP08240 638 aaKnown RBP6.25□□□□□ -1.41
SPEN-204ENST00000471538 PABPC4LP0CB38 370 aaKnown RBP6.25□□□□□ -1.41
SPEN-204ENST00000471538 UMPSP11172 480 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 ACPPP15309 386 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 EPB42P16452 691 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 HOXB9P17482 250 aaPredicted RBP6.25□□□□□ -1.41
SPEN-204ENST00000471538 CEBPBP17676 345 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 WEE1P30291 646 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 MMP12P39900 470 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 HNMTP50135 292 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 CCT8P50990 548 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 DGKQP52824 942 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 OR4D2P58180 307 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 RPL38P63173 70 aaKnown RBP6.25□□□□□ -1.41
SPEN-204ENST00000471538 HMGCS1Q01581 520 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 NHLH1Q02575 133 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 PRKCQQ04759 706 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 MAD2L1Q13257 205 aaPredicted RBP6.25□□□□□ -1.41
SPEN-204ENST00000471538 INPP5AQ14642 412 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 PTGR1Q14914 329 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 SKIV2LQ15477 1246 aaKnown RBP6.25□□□□□ -1.41
SPEN-204ENST00000471538 ATP6AP1Q15904 470 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 ZNF658BQ4V348 819 aaPredicted RBP6.25□□□□□ -1.41
SPEN-204ENST00000471538 LIN52Q52LA3 116 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 NHSL2Q5HYW2 709 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 NEK5Q6P3R8 708 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 SUSD1Q6UWL2 747 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 UBE2R2Q712K3 238 aaPredicted RBP6.25□□□□□ -1.41
SPEN-204ENST00000471538 SPRED1Q7Z699 444 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 MSRB3Q8IXL7 192 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 RGL4Q8IZJ4 473 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 ST13P4Q8IZP2 240 aaPredicted RBP6.25□□□□□ -1.41
SPEN-204ENST00000471538 GALNT4Q8N4A0 578 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 PACRGLQ8N7B6 248 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 PAF1Q8N7H5 531 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 L3MBTL4Q8NA19 623 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 MFSD2AQ8NA29 543 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 GLB1L3Q8NCI6 653 aaPredicted RBP6.25□□□□□ -1.41
SPEN-204ENST00000471538 TRPV3Q8NET8 790 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 OR8J3Q8NGG0 315 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 HCAR2Q8TDS4 363 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 CYB5D2Q8WUJ1 264 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 SORCS1Q8WY21 1168 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 GTF2H4Q92759 462 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 SCAMP4Q969E2 229 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 EME1Q96AY2 570 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 LRIG1Q96JA1 1093 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 FCRL1Q96LA6 429 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 CCDC115Q96NT0 180 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 VPS35Q96QK1 796 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 CGREF1Q99674 301 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 KCTD14Q9BQ13 255 aaPredicted RBP6.25□□□□□ -1.41
SPEN-204ENST00000471538 REPIN1Q9BWE0 567 aaKnown RBP6.25□□□□□ -1.41
SPEN-204ENST00000471538 OSBPL11Q9BXB4 747 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 SPATA16Q9BXB7 569 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 ACPTQ9BZG2 426 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 EPB41L1Q9H4G0 881 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 FAM83DQ9H4H8 585 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 CLMPQ9H6B4 373 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 RPF2Q9H7B2 306 aaKnown RBP6.25□□□□□ -1.41
SPEN-204ENST00000471538 PARVBQ9HBI1 364 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 LRTM1Q9HBL6 345 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 PCDH12Q9NPG4 1184 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 KLQ9UEF7 1012 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 CD84Q9UIB8 345 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 ZNF490Q9ULM2 529 aaPredicted RBP6.25□□□□□ -1.41
SPEN-204ENST00000471538 USP22Q9UPT9 525 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 ANGPTL3Q9Y5C1 460 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 AK5Q9Y6K8 562 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 ATG2AQ2TAZ0 1938 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 CACNA1HO95180 2353 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 DCHS1Q96JQ0 3298 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 ARHGAP10A1A4S6 786 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 LINC01553A4QN01 128 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 H3BM21 787 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 FFAR3O14843 346 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 KPNA5O15131 536 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 GPR42O15529 346 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 DFNA5O60443 496 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 XYLBO75191 536 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 ULK1O75385 1050 aa6.25□□□□□ -1.41
SPEN-204ENST00000471538 MTX2O75431 263 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms