RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.78□□□□□ -0.36
CPSF4-210ENST00000469897 MARCH4Q9P2E8 410 aaPredicted RBP12.78□□□□□ -0.36
CPSF4-210ENST00000469897 TCAF1Q9Y4C2 921 aa12.78□□□□□ -0.36
CPSF4-210ENST00000469897 CD3EAPO15446 510 aaKnown RBP12.77□□□□□ -0.37
CPSF4-210ENST00000469897 SEMA7AO75326 666 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 APOA4P06727 396 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 UMODP07911 640 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 CD63P08962 238 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 AOAHP28039 575 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 PKLRP30613 574 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 PPARGP37231 505 aaPredicted RBP12.77□□□□□ -0.37
CPSF4-210ENST00000469897 RAB28P51157 221 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 SESN2P58004 480 aaPredicted RBP12.77□□□□□ -0.37
CPSF4-210ENST00000469897 KCTD19Q17RG1 926 aaPredicted RBP12.77□□□□□ -0.37
CPSF4-210ENST00000469897 PCID2Q5JVF3 399 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 DCAF10Q5QP82 559 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 FCRL6Q6DN72 434 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 TTLL10Q6ZVT0 673 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 TAX1BP1Q86VP1 789 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 HPS6Q86YV9 775 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 CCDC89Q8N998 374 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 CLEC1AQ8NC01 280 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 PPHLN1Q8NEY8 458 aaKnown RBP12.77□□□□□ -0.37
CPSF4-210ENST00000469897 OR2Y1Q8NGV0 311 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 PROKR1Q8TCW9 393 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 IP6K3Q96PC2 410 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 MENTQ9BUN1 341 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 TSSK1BQ9BXA7 367 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 ZNF552Q9H707 407 aaPredicted RBP12.77□□□□□ -0.37
CPSF4-210ENST00000469897 CATSPERZQ9NTU4 200 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 P4HTMQ9NXG6 502 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 PAK5Q9P286 719 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 C5AR2Q9P296 337 aa12.77□□□□□ -0.37
CPSF4-210ENST00000469897 SLCO2B1O94956 709 aa12.76□□□□□ -0.37
CPSF4-210ENST00000469897 CRADDP78560 199 aa12.76□□□□□ -0.37
CPSF4-210ENST00000469897 MRPL49Q13405 166 aaKnown RBP12.76□□□□□ -0.37
CPSF4-210ENST00000469897 PTRHD1Q6GMV3 140 aaKnown RBP12.76□□□□□ -0.37
CPSF4-210ENST00000469897 TTC23LQ6PF05 361 aa12.76□□□□□ -0.37
CPSF4-210ENST00000469897 FIGLAQ6QHK4 219 aa12.76□□□□□ -0.37
CPSF4-210ENST00000469897 PPP1R32Q7Z5V6 425 aa12.76□□□□□ -0.37
CPSF4-210ENST00000469897 GALNT16Q8N428 558 aa12.76□□□□□ -0.37
CPSF4-210ENST00000469897 CISD2Q8N5K1 135 aaKnown RBP12.76□□□□□ -0.37
CPSF4-210ENST00000469897 PRR7Q8TB68 274 aa12.76□□□□□ -0.37
CPSF4-210ENST00000469897 PNPLA2Q96AD5 504 aa12.76□□□□□ -0.37
CPSF4-210ENST00000469897 SLC22A18Q96BI1 424 aa12.76□□□□□ -0.37
CPSF4-210ENST00000469897 SNRNP40Q96DI7 357 aaKnown RBP12.76□□□□□ -0.37
CPSF4-210ENST00000469897 ZBTB20Q9HC78 741 aaPredicted RBP12.76□□□□□ -0.37
CPSF4-210ENST00000469897 ATP13A2Q9NQ11 1180 aa12.76□□□□□ -0.37
CPSF4-210ENST00000469897 SLC39A10Q9ULF5 831 aa12.76□□□□□ -0.37
CPSF4-210ENST00000469897 TTC7AQ9ULT0 858 aaPredicted RBP12.76□□□□□ -0.37
CPSF4-210ENST00000469897 SRPK3Q9UPE1 567 aa12.76□□□□□ -0.37
CPSF4-210ENST00000469897 FLNCQ14315 2725 aa12.76□□□□□ -0.37
CPSF4-210ENST00000469897 COL12A1Q99715 3063 aa12.76□□□□□ -0.37
CPSF4-210ENST00000469897 PRMT5O14744 637 aaPredicted RBP12.75□□□□□ -0.37
CPSF4-210ENST00000469897 RASGRF2O14827 1237 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 NDUFS3O75489 264 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 S1PR4O95977 384 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 IGHEP01854 428 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 RPN2P04844 631 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 ITGAXP20702 1163 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 MCM3P25205 808 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 NMBRP28336 390 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 ARSFP54793 590 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 MYBPC3Q14896 1274 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 RPS6KA1Q15418 735 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 CCNG2Q16589 344 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 CYP2A13Q16696 494 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 CCSMST1Q4G0I0 132 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 ZC3H12BQ5HYM0 836 aaKnown RBP12.75□□□□□ -0.37
CPSF4-210ENST00000469897 AARS2Q5JTZ9 985 aaKnown RBP12.75□□□□□ -0.37
CPSF4-210ENST00000469897 MEI1Q5TIA1 1274 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 VWA5B1Q5TIE3 1220 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 CES3Q6UWW8 571 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 UNC5DQ6UXZ4 953 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 OVCH1Q7RTY7 1134 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 DCUN1D3Q8IWE4 304 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 OR2L8Q8NGY9 312 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 SKA2Q8WVK7 121 aaPredicted RBP12.75□□□□□ -0.37
CPSF4-210ENST00000469897 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.75□□□□□ -0.37
CPSF4-210ENST00000469897 PEX13Q92968 403 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 SPENQ96T58 3664 aaKnown RBP12.75□□□□□ -0.37
CPSF4-210ENST00000469897 P2RY12Q9H244 342 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 DRG1Q9Y295 367 aaKnown RBP12.75□□□□□ -0.37
CPSF4-210ENST00000469897 NFS1Q9Y697 457 aa12.75□□□□□ -0.37
CPSF4-210ENST00000469897 ZNF106Q9H2Y7 1883 aaKnown RBP12.74□□□□□ -0.37
CPSF4-210ENST00000469897 KRT87PA6NCN2 255 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 PRICKLE3O43900 615 aaPredicted RBP12.74□□□□□ -0.37
CPSF4-210ENST00000469897 C1orf105O95561 183 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 RNF224P0DH78 156 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 VARSP26640 1264 aaKnown RBP12.74□□□□□ -0.37
CPSF4-210ENST00000469897 CDC25BP30305 580 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 GCGRP47871 477 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 KCNJ1P48048 391 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 NPY2RP49146 381 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 TTPAP49638 278 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 SIX1Q15475 284 aaPredicted RBP12.74□□□□□ -0.37
CPSF4-210ENST00000469897 SHISA6Q6ZSJ9 500 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 GSTA5Q7RTV2 222 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 GSDMBQ8TAX9 411 aa12.74□□□□□ -0.37
CPSF4-210ENST00000469897 SSC4DQ8WTU2 575 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms