RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 TECRLQ5HYJ1 363 aa14.32□□□□□ -0.12
COL9A3-209ENST00000469852 C16orf46Q6P387 395 aa14.32□□□□□ -0.12
COL9A3-209ENST00000469852 TTC23LQ6PF05 361 aa14.32□□□□□ -0.12
COL9A3-209ENST00000469852 ZNF574Q6ZN55 896 aaPredicted RBP14.32□□□□□ -0.12
COL9A3-209ENST00000469852 CCDC91Q7Z6B0 441 aa14.32□□□□□ -0.12
COL9A3-209ENST00000469852 ADAMTSL2Q86TH1 951 aa14.32□□□□□ -0.12
COL9A3-209ENST00000469852 SRRM1Q8IYB3 904 aaKnown RBP14.32□□□□□ -0.12
COL9A3-209ENST00000469852 LRRC56Q8IYG6 542 aaPredicted RBP14.32□□□□□ -0.12
COL9A3-209ENST00000469852 OR2L8Q8NGY9 312 aa14.32□□□□□ -0.12
COL9A3-209ENST00000469852 FLVCR1-AS1Q8TAF5 88 aa14.32□□□□□ -0.12
COL9A3-209ENST00000469852 MAGEC3Q8TD91 643 aa14.32□□□□□ -0.12
COL9A3-209ENST00000469852 MCOLN3Q8TDD5 553 aa14.32□□□□□ -0.12
COL9A3-209ENST00000469852 ACMSDQ8TDX5 336 aa14.32□□□□□ -0.12
COL9A3-209ENST00000469852 NCSTNQ92542 709 aa14.32□□□□□ -0.12
COL9A3-209ENST00000469852 EXT2Q93063 718 aa14.32□□□□□ -0.12
COL9A3-209ENST00000469852 PPM1MQ96MI6 270 aa14.32□□□□□ -0.12
COL9A3-209ENST00000469852 HRASLS2Q9NWW9 162 aa14.32□□□□□ -0.12
COL9A3-209ENST00000469852 TMEM216Q9P0N5 145 aa14.32□□□□□ -0.12
COL9A3-209ENST00000469852 SPATA7Q9P0W8 599 aa14.32□□□□□ -0.12
COL9A3-209ENST00000469852 STOX2Q9P2F5 926 aaPredicted RBP14.32□□□□□ -0.12
COL9A3-209ENST00000469852 PCDHGA1Q9Y5H4 931 aa14.32□□□□□ -0.12
COL9A3-209ENST00000469852 CHD8Q9HCK8 2581 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 MAP1BP46821 2468 aaKnown RBP14.31□□□□□ -0.12
COL9A3-209ENST00000469852 A0A1W2PPV9 198 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 NCF1BA6NI72 391 aaPredicted RBP14.31□□□□□ -0.12
COL9A3-209ENST00000469852 NCF1CA8MVU1 366 aaPredicted RBP14.31□□□□□ -0.12
COL9A3-209ENST00000469852 D6RAR5 112 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 UBXN8O00124 270 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 RGS16O15492 202 aaPredicted RBP14.31□□□□□ -0.12
COL9A3-209ENST00000469852 DUX1O43812 170 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 KIF1CO43896 1103 aaKnown RBP14.31□□□□□ -0.12
COL9A3-209ENST00000469852 KERAO60938 352 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 CHRM5P08912 532 aaPredicted RBP14.31□□□□□ -0.12
COL9A3-209ENST00000469852 ENO2P09104 434 aaPredicted RBP14.31□□□□□ -0.12
COL9A3-209ENST00000469852 COL6A2P12110 1019 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 NCF1P14598 390 aaPredicted RBP14.31□□□□□ -0.12
COL9A3-209ENST00000469852 PSMB5P28074 263 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 SHMT2P34897 504 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 PPM1FP49593 454 aaPredicted RBP14.31□□□□□ -0.12
COL9A3-209ENST00000469852 SLC18A2Q05940 514 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 SQSTM1Q13501 440 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 ACAP2Q15057 778 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 CYP2A13Q16696 494 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 FBXO48Q5FWF7 155 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 TNFAIP8L3Q5GJ75 292 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 SUSD1Q6UWL2 747 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 FRA10AC1Q70Z53 315 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 B3GNT8Q7Z7M8 397 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 GPSM1Q86YR5 675 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 FAM20CQ8IXL6 584 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 TMEM151AQ8N4L1 468 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 AHCYL2Q96HN2 611 aaKnown RBP14.31□□□□□ -0.12
COL9A3-209ENST00000469852 CABS1Q96KC9 395 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 CCDC138Q96M89 665 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 GFM1Q96RP9 751 aaKnown RBP14.31□□□□□ -0.12
COL9A3-209ENST00000469852 ABCG4Q9H172 646 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 CENPHQ9H3R5 247 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 ARL15Q9NXU5 204 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 XPR1Q9UBH6 696 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 EMCNQ9ULC0 261 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 RNF112Q9ULX5 631 aa14.31□□□□□ -0.12
COL9A3-209ENST00000469852 FAM221BA6H8Z2 402 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 E7ENX8 843 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 TK2O00142 265 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 CAPN5O15484 640 aaPredicted RBP14.3□□□□□ -0.12
COL9A3-209ENST00000469852 TAPBPO15533 448 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 PRICKLE3O43900 615 aaPredicted RBP14.3□□□□□ -0.12
COL9A3-209ENST00000469852 CPNE6O95741 557 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 MTHFD2P13995 350 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 LSSP48449 732 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 KPNA2P52292 529 aaKnown RBP14.3□□□□□ -0.12
COL9A3-209ENST00000469852 PNLIPRP1P54315 467 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 YBX1P67809 324 aaKnown RBP14.3□□□□□ -0.12
COL9A3-209ENST00000469852 TAP2Q03519 686 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 CDCP2Q5VXM1 449 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 ANKS6Q68DC2 871 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 IRGCQ6NXR0 463 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 AGTRAPQ6RW13 159 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 HDXQ7Z353 690 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 TRIM73Q86UV7 250 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 OOSP2Q86WS3 158 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 MARCH9Q86YJ5 346 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 RHEBL1Q8TAI7 183 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 HMGCLL1Q8TB92 370 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 STAG3L4Q8TBR4 150 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 FBXL8Q96CD0 374 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 SCYL1Q96KG9 808 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 TGM7Q96PF1 710 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 OR2A14Q96R47 310 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 TMEM79Q9BSE2 394 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 ATG10Q9H0Y0 220 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 SEMA6CQ9H3T2 930 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 ACTR10Q9NZ32 417 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 OR6C2Q9NZP2 312 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 CPSF2Q9P2I0 782 aaKnown RBP14.3□□□□□ -0.12
COL9A3-209ENST00000469852 KLHL3Q9UH77 587 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 APOBEC2Q9Y235 224 aaKnown RBP14.3□□□□□ -0.12
COL9A3-209ENST00000469852 ADAMTS20P59510 1910 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 PTPRBP23467 1997 aa14.3□□□□□ -0.12
COL9A3-209ENST00000469852 MN1Q10571 1320 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms