RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 S1PR4O95977 384 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 AGXTP21549 392 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 MGAT1P26572 445 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 PGDP52209 483 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 GBX1Q14549 363 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 KCNJ11Q14654 390 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 KCTD19Q17RG1 926 aaPredicted RBP15.69■□□□□ 0.1
COL9A3-208ENST00000469802 ARMC3Q5W041 872 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 PTRHD1Q6GMV3 140 aaKnown RBP15.69■□□□□ 0.1
COL9A3-208ENST00000469802 TLDC1Q6P9B6 456 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 GSTA5Q7RTV2 222 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 FAM20CQ8IXL6 584 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 LMNTD1Q8N9Z9 388 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 LPGAT1Q92604 370 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 N4BP2L2Q92802 583 aaPredicted RBP15.69■□□□□ 0.1
COL9A3-208ENST00000469802 BIRC8Q96P09 236 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 IL17FQ96PD4 163 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 C17orf62Q9BQA9 187 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 SLC7A5P2Q9GIP4 190 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 HOMER3Q9NSC5 361 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 CIDEBQ9UHD4 219 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 SOX13Q9UN79 622 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 PLCL2Q9UPR0 1127 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 PLAAQ9Y263 795 aa15.69■□□□□ 0.1
COL9A3-208ENST00000469802 USP9XQ93008 2570 aaPredicted RBP15.68■□□□□ 0.1
COL9A3-208ENST00000469802 MDC1Q14676 2089 aaKnown RBP15.68■□□□□ 0.1
COL9A3-208ENST00000469802 KPNA5O15131 536 aa15.68■□□□□ 0.1
COL9A3-208ENST00000469802 PRICKLE3O43900 615 aaPredicted RBP15.68■□□□□ 0.1
COL9A3-208ENST00000469802 VAPBO95292 243 aa15.68■□□□□ 0.1
COL9A3-208ENST00000469802 CXCR5P32302 372 aa15.68■□□□□ 0.1
COL9A3-208ENST00000469802 CCL11P51671 97 aa15.68■□□□□ 0.1
COL9A3-208ENST00000469802 ADARP55265 1226 aaKnown RBP15.68■□□□□ 0.1
COL9A3-208ENST00000469802 ATP1A4Q13733 1029 aa15.68■□□□□ 0.1
COL9A3-208ENST00000469802 KIAA0930Q6ICG6 404 aaPredicted RBP15.68■□□□□ 0.1
COL9A3-208ENST00000469802 MED25Q71SY5 747 aa15.68■□□□□ 0.1
COL9A3-208ENST00000469802 MRGPREQ86SM8 312 aa15.68■□□□□ 0.1
COL9A3-208ENST00000469802 RAB43Q86YS6 212 aa15.68■□□□□ 0.1
COL9A3-208ENST00000469802 ZNF655Q8N720 491 aaPredicted RBP15.68■□□□□ 0.1
COL9A3-208ENST00000469802 TMEM102Q8N9M5 508 aaPredicted RBP15.68■□□□□ 0.1
COL9A3-208ENST00000469802 CFAP61Q8NHU2 1237 aa15.68■□□□□ 0.1
COL9A3-208ENST00000469802 HMGCLL1Q8TB92 370 aa15.68■□□□□ 0.1
COL9A3-208ENST00000469802 SLC22A18Q96BI1 424 aa15.68■□□□□ 0.1
COL9A3-208ENST00000469802 RAB11FIP5Q9BXF6 653 aa15.68■□□□□ 0.1
COL9A3-208ENST00000469802 EURLQ9NYK6 297 aa15.68■□□□□ 0.1
COL9A3-208ENST00000469802 DHCR7Q9UBM7 475 aaKnown RBP15.68■□□□□ 0.1
COL9A3-208ENST00000469802 TTC7AQ9ULT0 858 aaPredicted RBP15.68■□□□□ 0.1
COL9A3-208ENST00000469802 PPP2R2CQ9Y2T4 447 aa15.68■□□□□ 0.1
COL9A3-208ENST00000469802 PCDHGB7Q9Y5F8 929 aa15.68■□□□□ 0.1
COL9A3-208ENST00000469802 DOCK10Q96BY6 2186 aa15.68■□□□□ 0.1
COL9A3-208ENST00000469802 CNOT3O75175 753 aaKnown RBP15.67■□□□□ 0.1
COL9A3-208ENST00000469802 NDUFS3O75489 264 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 SORBS2O94875 1100 aaKnown RBP15.67■□□□□ 0.1
COL9A3-208ENST00000469802 FKBP9O95302 570 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 C1orf105O95561 183 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 ITGAXP20702 1163 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 ATP5DP30049 168 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 EIF3BP55884 814 aaKnown RBP15.67■□□□□ 0.1
COL9A3-208ENST00000469802 DCDP81605 110 aaKnown RBP15.67■□□□□ 0.1
COL9A3-208ENST00000469802 CCSMST1Q4G0I0 132 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 RNF187Q5TA31 235 aaPredicted RBP15.67■□□□□ 0.1
COL9A3-208ENST00000469802 C1orf189Q5VU69 101 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 MRPL14Q6P1L8 145 aaKnown RBP15.67■□□□□ 0.1
COL9A3-208ENST00000469802 TTC27Q6P3X3 843 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 CES3Q6UWW8 571 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 OTOAQ7RTW8 1153 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 TAX1BP1Q86VP1 789 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 RASGEF1CQ8N431 466 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 FDCSPQ8NFU4 85 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 DENND1AQ8TEH3 1009 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 ZNF285Q96NJ3 590 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 NUDT9Q9BW91 350 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 RUVBL2Q9Y230 463 aaKnown RBP15.67■□□□□ 0.1
COL9A3-208ENST00000469802 KLHL20Q9Y2M5 609 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 KLK4Q9Y5K2 254 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 NFS1Q9Y697 457 aa15.67■□□□□ 0.1
COL9A3-208ENST00000469802 GOLGA8KD6RF30 607 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 GOLGA8TH3BQL2 631 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 ONECUT2O95948 504 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 OGNP20774 298 aaKnown RBP15.66■□□□□ 0.1
COL9A3-208ENST00000469802 BDKRB1P46663 353 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 RRADP55042 308 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 MLLT10P55197 1068 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 NADK2Q4G0N4 442 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 NKAIN1Q4KMZ8 207 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 ANKRD22Q5VYY1 191 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 FCRL6Q6DN72 434 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 MRNIPQ6NTE8 343 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 CAND1Q86VP6 1230 aaKnown RBP15.66■□□□□ 0.1
COL9A3-208ENST00000469802 C2orf73Q8N5S3 287 aaPredicted RBP15.66■□□□□ 0.1
COL9A3-208ENST00000469802 OR2Y1Q8NGV0 311 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 RAD51AP1Q96B01 352 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 IP6K3Q96PC2 410 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 TCF12Q99081 682 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 SLC22A11Q9NSA0 550 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 TXLNGQ9NUQ3 528 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 INTS7Q9NVH2 962 aaKnown RBP15.66■□□□□ 0.1
COL9A3-208ENST00000469802 SLC39A10Q9ULF5 831 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 NEU2Q9Y3R4 380 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 ZNF451Q9Y4E5 1061 aa15.66■□□□□ 0.1
COL9A3-208ENST00000469802 MRFAP1Q9Y605 127 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms