RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 GRID2IPA4D2P6 1211 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 SOCS6O14544 535 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 MED26O95402 600 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 AP2A1O95782 977 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 GOT2P00505 430 aaKnown RBP11.78□□□□□ -0.52
HDAC3-204ENST00000469207 OR56A5P0C7T3 313 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 VARSP26640 1264 aaKnown RBP11.78□□□□□ -0.52
HDAC3-204ENST00000469207 GCGRP47871 477 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 OR1D4P47884 311 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 SOX8P57073 446 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 HSPA14Q0VDF9 509 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 CYP2A13Q16696 494 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 SLC5A12Q1EHB4 618 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 RAD9BQ6WBX8 426 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 COX15Q7KZN9 410 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 TMTC1Q8IUR5 882 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 CCDC170Q8IYT3 715 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 KRT222Q8N1A0 295 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 ACRBPQ8NEB7 543 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 OR13J1Q8NGT2 312 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 ALS2CR12Q96Q35 445 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 BARD1Q99728 777 aaKnown RBP11.78□□□□□ -0.52
HDAC3-204ENST00000469207 NDC1Q9BTX1 674 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 TRIM5Q9C035 493 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 CHRNA10Q9GZZ6 450 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 LRRC40Q9H9A6 602 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 CDC23Q9UJX2 597 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 FBXL4Q9UKA2 621 aa11.78□□□□□ -0.52
HDAC3-204ENST00000469207 CENPEQ02224 2701 aa11.77□□□□□ -0.52
HDAC3-204ENST00000469207 DOCK10Q96BY6 2186 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 NRP2O60462 931 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 FTH1P02794 183 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 ALPPP05187 535 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 ETS1P14921 441 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 MMP11P24347 488 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 PSMA3P25788 255 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 PKLRP30613 574 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 CYLC1P35663 651 aaPredicted RBP11.77□□□□□ -0.53
HDAC3-204ENST00000469207 YBX1P67809 324 aaKnown RBP11.77□□□□□ -0.53
HDAC3-204ENST00000469207 SRSF11Q05519 484 aaKnown RBP11.77□□□□□ -0.53
HDAC3-204ENST00000469207 Q0VFX4 171 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 ELOAQ14241 798 aaKnown RBP11.77□□□□□ -0.53
HDAC3-204ENST00000469207 ITIH4Q14624 930 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 KIR2DS3Q14952 304 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 NKG7Q16617 165 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 KCTD19Q17RG1 926 aaPredicted RBP11.77□□□□□ -0.53
HDAC3-204ENST00000469207 CCSMST1Q4G0I0 132 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 SYTL3Q4VX76 610 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 PRAMEF13Q5VWM6 474 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 KIRREL2Q6UWL6 708 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 PACS1Q6VY07 963 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 ZNF534Q76KX8 674 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 OVCH1Q7RTY7 1134 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 KCNMB4Q86W47 210 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 LRRC57Q8N9N7 239 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 CATSPER1Q8NEC5 780 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 DNAJB14Q8TBM8 379 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 UBE2Q2Q8WVN8 375 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 ATG4AQ8WYN0 398 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 SPSB2Q99619 263 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 C17orf62Q9BQA9 187 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 ETNK1Q9HBU6 452 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.77□□□□□ -0.53
HDAC3-204ENST00000469207 CTSFQ9UBX1 484 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 NOVA2Q9UNW9 492 aaKnown RBP11.77□□□□□ -0.53
HDAC3-204ENST00000469207 OSGIN2Q9Y236 505 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 MAU2Q9Y6X3 613 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 CROCCQ5TZA2 2017 aa11.77□□□□□ -0.53
HDAC3-204ENST00000469207 CREBBPQ92793 2442 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 LRRTM2O43300 516 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 KLHL18O94889 574 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 GSTM1P09488 218 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 CD9P21926 228 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 RAB28P51157 221 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 GSTM4Q03013 218 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 AIMP2Q13155 320 aaKnown RBP11.76□□□□□ -0.53
HDAC3-204ENST00000469207 KLF1Q13351 362 aaPredicted RBP11.76□□□□□ -0.53
HDAC3-204ENST00000469207 SF1Q15637 639 aaKnown RBP11.76□□□□□ -0.53
HDAC3-204ENST00000469207 FRMPD2BQ6IN97 320 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 FIGLAQ6QHK4 219 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 SRRM1Q8IYB3 904 aaKnown RBP11.76□□□□□ -0.53
HDAC3-204ENST00000469207 PRSS58Q8IYP2 241 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 SLC22A15Q8IZD6 547 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 DNAAF3Q8N9W5 541 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 SLC35B2Q8TB61 432 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 GRHL3Q8TE85 626 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 CNDP1Q96KN2 507 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 PPP1R2P1Q96PQ5 205 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 CUTCQ9NTM9 273 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 SRPK3Q9UPE1 567 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 RUVBL2Q9Y230 463 aaKnown RBP11.76□□□□□ -0.53
HDAC3-204ENST00000469207 HS3ST3B1Q9Y662 390 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 CSMD1Q96PZ7 3565 aa11.76□□□□□ -0.53
HDAC3-204ENST00000469207 A0A1B0GX78 115 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 CTSVO60911 334 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 GPC4O75487 556 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 FTCDO95954 541 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 IGHEP01854 428 aa11.75□□□□□ -0.53
HDAC3-204ENST00000469207 PTMAP06454 111 aaKnown RBP11.75□□□□□ -0.53
HDAC3-204ENST00000469207 CD63P08962 238 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms