RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 TAP2Q03519 686 aa12.46□□□□□ -0.42
RUNX1-213ENST00000469087 SH2D4BQ5SQS7 431 aa12.46□□□□□ -0.42
RUNX1-213ENST00000469087 GKAP1Q5VSY0 366 aaPredicted RBP12.46□□□□□ -0.42
RUNX1-213ENST00000469087 CEP68Q76N32 757 aa12.46□□□□□ -0.42
RUNX1-213ENST00000469087 SYVN1Q86TM6 617 aa12.46□□□□□ -0.42
RUNX1-213ENST00000469087 SYTL1Q8IYJ3 562 aa12.46□□□□□ -0.42
RUNX1-213ENST00000469087 OR56A3Q8NH54 315 aa12.46□□□□□ -0.42
RUNX1-213ENST00000469087 AGAP11Q8TF27 550 aa12.46□□□□□ -0.42
RUNX1-213ENST00000469087 PATE1Q8WXA2 126 aa12.46□□□□□ -0.42
RUNX1-213ENST00000469087 SKA1Q96BD8 255 aa12.46□□□□□ -0.42
RUNX1-213ENST00000469087 SEC16BQ96JE7 1060 aa12.46□□□□□ -0.42
RUNX1-213ENST00000469087 CDK15Q96Q40 435 aa12.46□□□□□ -0.42
RUNX1-213ENST00000469087 MVB12BQ9H7P6 319 aa12.46□□□□□ -0.42
RUNX1-213ENST00000469087 KLHL14Q9P2G3 628 aa12.46□□□□□ -0.42
RUNX1-213ENST00000469087 TRAF6Q9Y4K3 522 aa12.46□□□□□ -0.42
RUNX1-213ENST00000469087 PRR5-ARHGAP8B1AHC4 643 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 MATN2O00339 956 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 FGF4P08620 206 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 TROVE2P10155 538 aaKnown RBP eCLIP12.45□□□□□ -0.42
RUNX1-213ENST00000469087 GNSP15586 552 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 PNLIPRP1P54315 467 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 FOXA1P55317 472 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 ERVPABLB-1P60509 514 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 KRT33BQ14525 404 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 TEAD4Q15561 434 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 RBBP7Q16576 425 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 KIF19Q2TAC6 998 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 UGT3A2Q3SY77 523 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 MAVSQ7Z434 540 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 THOC6Q86W42 341 aaKnown RBP12.45□□□□□ -0.42
RUNX1-213ENST00000469087 WDR75Q8IWA0 830 aaKnown RBP12.45□□□□□ -0.42
RUNX1-213ENST00000469087 NAGSQ8N159 534 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 C2orf73Q8N5S3 287 aaPredicted RBP12.45□□□□□ -0.42
RUNX1-213ENST00000469087 DCBLD1Q8N8Z6 715 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 PIGKQ92643 395 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 MED8Q96G25 268 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 OR4K3Q96R72 315 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 POLG2Q9UHN1 485 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 ANGPTL3Q9Y5C1 460 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 SNX11Q9Y5W9 270 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 USH1CQ9Y6N9 552 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 COLEC10Q9Y6Z7 277 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 PCM1Q15154 2024 aa12.45□□□□□ -0.42
RUNX1-213ENST00000469087 TP53BP1Q12888 1972 aaPredicted RBP12.45□□□□□ -0.42
RUNX1-213ENST00000469087 A0A0G2JND7 137 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 TNFRSF10AO00220 468 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 YY2O15391 372 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 PRAMEF4O60810 478 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 OR4F21O95013 312 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 ESRRBO95718 433 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 JUNP05412 331 aaKnown RBP12.44□□□□□ -0.42
RUNX1-213ENST00000469087 ERGP11308 486 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 SERPINB3P29508 390 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 CTSKP43235 329 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 AQP5P55064 265 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 HNRNPKP61978 463 aaKnown RBP eCLIP12.44□□□□□ -0.42
RUNX1-213ENST00000469087 SIM2Q14190 667 aaPredicted RBP12.44□□□□□ -0.42
RUNX1-213ENST00000469087 ELOCQ15369 112 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 VWA5B1Q5TIE3 1220 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 PRAMEF9Q5VWM5 478 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 CLEC6AQ6EIG7 209 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 LETMD1Q6P1Q0 360 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 SUSD1Q6UWL2 747 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 LRRC70Q7Z2Q7 622 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 SYT12Q8IV01 421 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 KLHDC8AQ8IYD2 350 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 CLYBLQ8N0X4 340 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 FAM46DQ8NEK8 389 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 MAPK15Q8TD08 544 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 LMX1AQ8TE12 382 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 C10orf82Q8WW14 230 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 ATP6V1E2Q96A05 226 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 KCNA7Q96RP8 456 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 ZNF382Q96SR6 550 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 XKR8Q9H6D3 395 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 ERVMER34-1Q9H9K5 563 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 ABCF3Q9NUQ8 709 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 DNAJC11Q9NVH1 559 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 LNPEPQ9UIQ6 1025 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 FIS1Q9Y3D6 152 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 HEBP2Q9Y5Z4 205 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 PI4KAP42356 2102 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 KMT2EQ8IZD2 1858 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 TMEM131Q92545 1883 aa12.44□□□□□ -0.42
RUNX1-213ENST00000469087 SDC3O75056 442 aa12.43□□□□□ -0.42
RUNX1-213ENST00000469087 KATNA1O75449 491 aa12.43□□□□□ -0.42
RUNX1-213ENST00000469087 NPPBP16860 134 aa12.43□□□□□ -0.42
RUNX1-213ENST00000469087 XRCC1P18887 633 aaPredicted RBP12.43□□□□□ -0.42
RUNX1-213ENST00000469087 PKNOX1P55347 436 aa12.43□□□□□ -0.42
RUNX1-213ENST00000469087 TRAF3Q13114 568 aa12.43□□□□□ -0.42
RUNX1-213ENST00000469087 ARHGAP19Q14CB8 494 aa12.43□□□□□ -0.42
RUNX1-213ENST00000469087 CYP2A13Q16696 494 aa12.43□□□□□ -0.42
RUNX1-213ENST00000469087 MILR1Q7Z6M3 343 aa12.43□□□□□ -0.42
RUNX1-213ENST00000469087 SNX31Q8N9S9 440 aa12.43□□□□□ -0.42
RUNX1-213ENST00000469087 LINC01555Q8NAE3 123 aa12.43□□□□□ -0.42
RUNX1-213ENST00000469087 OR4F6Q8NGB9 312 aa12.43□□□□□ -0.42
RUNX1-213ENST00000469087 OR52E1Q8NGJ3 308 aa12.43□□□□□ -0.42
RUNX1-213ENST00000469087 CXorf40BQ96DE9 158 aa12.43□□□□□ -0.42
RUNX1-213ENST00000469087 EBF4Q9BQW3 602 aa12.43□□□□□ -0.42
RUNX1-213ENST00000469087 NTMT1Q9BV86 223 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms