RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 C3orf38Q5JPI3 329 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 ANKS6Q68DC2 871 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 RAPH1Q70E73 1250 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 TAOK1Q7L7X3 1001 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 CARFQ8N187 725 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 C2orf73Q8N5S3 287 aaPredicted RBP11.56□□□□□ -0.56
VPS13D-204ENST00000469054 LMNTD1Q8N9Z9 388 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 DCAKDQ8WVC6 231 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 KLHL6Q8WZ60 621 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 SLC22A18Q96BI1 424 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 HIST1H2AHQ96KK5 128 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 CCDC138Q96M89 665 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 PPM1MQ96MI6 270 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 OR2A14Q96R47 310 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 HIST1H2AJQ99878 128 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 CCDC77Q9BR77 488 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 H2AFJQ9BTM1 129 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 DHRS4Q9BTZ2 278 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 DERL2Q9GZP9 239 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 ZNF768Q9H5H4 540 aaKnown RBP11.56□□□□□ -0.56
VPS13D-204ENST00000469054 POLR1BQ9H9Y6 1135 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 RRAGDQ9NQL2 400 aaPredicted RBP11.56□□□□□ -0.56
VPS13D-204ENST00000469054 C1GALT1Q9NS00 363 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 FETUBQ9UGM5 382 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 IKZF3Q9UKT9 509 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 PCDHGA8Q9Y5G5 932 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 UNC13CQ8NB66 2214 aa11.56□□□□□ -0.56
VPS13D-204ENST00000469054 ZNF839A8K0R7 811 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 SLC16A8O95907 504 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 C2P06681 752 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 ENO2P09104 434 aaPredicted RBP11.55□□□□□ -0.56
VPS13D-204ENST00000469054 JMJD7P0C870 316 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 SLC35E2BP0CK96 405 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 CCDC166P0CW27 439 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 HGFP14210 728 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 UGT2B7P16662 529 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 CDH3P22223 829 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 CNTFP26441 200 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 GCAP28676 217 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 TYK2P29597 1187 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 HSD17B3P37058 310 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 SEPHS1P49903 392 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 CSRP3P50461 194 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 PNLIPRP1P54315 467 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 GABREP78334 506 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 FASTKQ14296 549 aaKnown RBP11.55□□□□□ -0.56
VPS13D-204ENST00000469054 CSHL1Q14406 222 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 PHKG1Q16816 387 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 LGSNQ5TDP6 509 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 FBXO38Q6PIJ6 1188 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 ADGRD1Q6QNK2 874 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 SPESP1Q6UW49 350 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 SBSNQ6UWP8 590 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 CCDC91Q7Z6B0 441 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 TAX1BP1Q86VP1 789 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 KMT5CQ86Y97 462 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 LSMEM2Q8N112 164 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 SPATA6LQ8N4H0 392 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 FLVCR1-AS1Q8TAF5 88 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 GATA6Q92908 595 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 CAVIN3Q969G5 261 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 ISL2Q96A47 359 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 NXPE2Q96DL1 559 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 PRR11Q96HE9 360 aaPredicted RBP11.55□□□□□ -0.56
VPS13D-204ENST00000469054 UBXN10Q96LJ8 280 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 MFRPQ9BY79 579 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 TRIM54Q9BYV2 358 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 PITPNM3Q9BZ71 974 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 SNX15Q9NRS6 342 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 CTNNAL1Q9UBT7 734 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 NOVA2Q9UNW9 492 aaKnown RBP11.55□□□□□ -0.56
VPS13D-204ENST00000469054 ACOT9Q9Y305 439 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 AK5Q9Y6K8 562 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 CACNA1AO00555 2505 aa11.55□□□□□ -0.56
VPS13D-204ENST00000469054 A0A087X1B8 175 aa11.54□□□□□ -0.56
VPS13D-204ENST00000469054 A0A096LPK6 155 aa11.54□□□□□ -0.56
VPS13D-204ENST00000469054 A0A1W2PPV9 198 aa11.54□□□□□ -0.56
VPS13D-204ENST00000469054 PMS2P1A4D2B8 440 aa11.54□□□□□ -0.56
VPS13D-204ENST00000469054 PABPN1LA6NDY0 278 aaKnown RBP11.54□□□□□ -0.56
VPS13D-204ENST00000469054 NPEPPSL1A6NEC2 478 aa11.54□□□□□ -0.56
VPS13D-204ENST00000469054 EFCAB7A8K855 629 aa11.54□□□□□ -0.56
VPS13D-204ENST00000469054 E7ENX8 843 aa11.54□□□□□ -0.56
VPS13D-204ENST00000469054 CDC7O00311 574 aa11.54□□□□□ -0.56
VPS13D-204ENST00000469054 PRICKLE3O43900 615 aaPredicted RBP11.54□□□□□ -0.56
VPS13D-204ENST00000469054 KRT37O76014 449 aa11.54□□□□□ -0.56
VPS13D-204ENST00000469054 ZBTB11O95625 1053 aaPredicted RBP11.54□□□□□ -0.56
VPS13D-204ENST00000469054 ALDOAP04075 364 aaKnown RBP11.54□□□□□ -0.56
VPS13D-204ENST00000469054 SHBGP04278 402 aa11.54□□□□□ -0.56
VPS13D-204ENST00000469054 SNRPAP09012 282 aaKnown RBP11.54□□□□□ -0.56
VPS13D-204ENST00000469054 FGF3P11487 239 aaPredicted RBP11.54□□□□□ -0.56
VPS13D-204ENST00000469054 CCL4P13236 92 aa11.54□□□□□ -0.56
VPS13D-204ENST00000469054 CD1DP15813 335 aa11.54□□□□□ -0.56
VPS13D-204ENST00000469054 NELFEP18615 380 aaKnown RBP11.54□□□□□ -0.56
VPS13D-204ENST00000469054 ITIH1P19827 911 aa11.54□□□□□ -0.56
VPS13D-204ENST00000469054 IMPA1P29218 277 aa11.54□□□□□ -0.56
VPS13D-204ENST00000469054 OAS2P29728 719 aaKnown RBP11.54□□□□□ -0.56
VPS13D-204ENST00000469054 SLC26A3P40879 764 aa11.54□□□□□ -0.56
VPS13D-204ENST00000469054 MAGEA12P43365 314 aa11.54□□□□□ -0.56
VPS13D-204ENST00000469054 SERPINB8P50452 374 aa11.54□□□□□ -0.56
VPS13D-204ENST00000469054 AP1S2P56377 157 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms