RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 SPAG6O75602 509 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 NELFEP18615 380 aaKnown RBP14.05□□□□□ -0.16
COL27A1-203ENST00000468565 PDHA2P29803 388 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 PREPP48147 710 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 PPP1CAP62136 330 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 SARNPP82979 210 aaKnown RBP14.05□□□□□ -0.16
COL27A1-203ENST00000468565 IL11RAQ14626 422 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 VASH2Q86V25 355 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 ELMO1Q92556 727 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 WBP1Q96G27 269 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 SLC41A2Q96JW4 573 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 FERD3LQ96RJ6 166 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 KIFC1Q9BW19 673 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 SSU72Q9NP77 194 aaKnown RBP14.05□□□□□ -0.16
COL27A1-203ENST00000468565 CATSPERZQ9NTU4 200 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 FGFR1OP2Q9NVK5 253 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 MATN2O00339 956 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 OR1I1O60431 355 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 MGAT1P26572 445 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 SSTR1P30872 391 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 MSH2P43246 934 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 TTPAP49638 278 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 FOXM1Q08050 763 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 CBLBQ13191 982 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 SRSF6Q13247 344 aaKnown RBP14.05□□□□□ -0.16
COL27A1-203ENST00000468565 BOP1Q14137 746 aaKnown RBP14.05□□□□□ -0.16
COL27A1-203ENST00000468565 MAP7Q14244 749 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 SEMA3AQ14563 771 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 ARMC6Q6NXE6 501 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 NLGN4XQ8N0W4 816 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 MPP5Q8N3R9 675 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 NLGN4YQ8NFZ3 816 aaPredicted RBP14.05□□□□□ -0.16
COL27A1-203ENST00000468565 FBF1Q8TES7 1133 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 OR6C1Q96RD1 312 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 TSSK1BQ9BXA7 367 aa14.05□□□□□ -0.16
COL27A1-203ENST00000468565 TRIT1Q9H3H1 467 aaKnown RBP14.05□□□□□ -0.16
COL27A1-203ENST00000468565 TFB2MQ9H5Q4 396 aaKnown RBP14.05□□□□□ -0.16
COL27A1-203ENST00000468565 IGHV5-51A0A0C4DH38 117 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 SLC5A10A0PJK1 596 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 OR6C74A6NCV1 312 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 SPAG7O75391 227 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 STK17BO94768 372 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 DLGAP3O95886 979 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 FGF5P12034 268 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 MAP4P27816 1152 aaKnown RBP14.04□□□□□ -0.16
COL27A1-203ENST00000468565 NMBRP28336 390 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 SH3BP2P78314 561 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 CRADDP78560 199 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 PRKAA1Q13131 559 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 ADGRD1Q6QNK2 874 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 IL22RA1Q8N6P7 574 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 TTC9Q92623 222 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 TFGQ92734 400 aaPredicted RBP14.04□□□□□ -0.16
COL27A1-203ENST00000468565 MRRFQ96E11 262 aaKnown RBP14.04□□□□□ -0.16
COL27A1-203ENST00000468565 CYTH2Q99418 400 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 PAFAH2Q99487 392 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 MAP3K3Q99759 626 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 DHRS4Q9BTZ2 278 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 SYBUQ9NX95 663 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 SOX13Q9UN79 622 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 PCDHGA4Q9Y5G9 962 aa14.04□□□□□ -0.16
COL27A1-203ENST00000468565 SNRNP200O75643 2136 aaKnown RBP14.04□□□□□ -0.16
COL27A1-203ENST00000468565 UBA6A0AVT1 1052 aaPredicted RBP14.03□□□□□ -0.16
COL27A1-203ENST00000468565 CD3EAPO15446 510 aaKnown RBP14.03□□□□□ -0.16
COL27A1-203ENST00000468565 GSTA1P08263 222 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 ACADLP28330 430 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 ELK3P41970 407 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 FOXK1P85037 733 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 SYTL3Q4VX76 610 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 PCSK4Q6UW60 755 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 SPATA21Q7Z572 469 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 PACS2Q86VP3 889 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 CNPY4Q8N129 248 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 ZSCAN1Q8NBB4 408 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 SIDT2Q8NBJ9 832 aaKnown RBP14.03□□□□□ -0.16
COL27A1-203ENST00000468565 OR4E2Q8NGC2 313 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 OR52E1Q8NGJ3 308 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 LCN9Q8WX39 176 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 PAIP2Q9BPZ3 127 aaKnown RBP14.03□□□□□ -0.16
COL27A1-203ENST00000468565 SRMSQ9H3Y6 488 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 CHMP2BQ9UQN3 213 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 ARL2BPQ9Y2Y0 163 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 ATMQ13315 3056 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 SMG1Q96Q15 3661 aaKnown RBP14.03□□□□□ -0.16
COL27A1-203ENST00000468565 ZWINTO95229 277 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 MLNP12872 115 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 KPNA2P52292 529 aaKnown RBP14.03□□□□□ -0.16
COL27A1-203ENST00000468565 WDR4P57081 412 aaKnown RBP14.03□□□□□ -0.16
COL27A1-203ENST00000468565 HSD11B2P80365 405 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 ACY1Q03154 408 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL27A1-203ENST00000468565 KIAA1614Q5VZ46 1190 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 TRPM8Q7Z2W7 1104 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 BPHLQ86WA6 291 aaPredicted RBP14.03□□□□□ -0.16
COL27A1-203ENST00000468565 D2HGDHQ8N465 521 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 ESX1Q8N693 406 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 MCUQ8NE86 351 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 DENND1AQ8TEH3 1009 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 SLC39A7Q92504 469 aa14.03□□□□□ -0.16
COL27A1-203ENST00000468565 ALKBH8Q96BT7 664 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms