RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 NFYCQ13952 458 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 TLR1Q15399 786 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 LSM12Q3MHD2 195 aaKnown RBP5.86□□□□□ -1.47
SHQ1-205ENST00000468371 PLA2G4EQ3MJ16 856 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 CERCAMQ5T4B2 595 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 BNIPLQ7Z465 357 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 STK32CQ86UX6 486 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 AADATQ8N5Z0 425 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 BRSK1Q8TDC3 778 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 DNASE2BQ8WZ79 361 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 CAMK1GQ96NX5 476 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 AGAP2Q99490 1192 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 CPNE1Q99829 537 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 PKP2Q99959 881 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 CCDC3Q9BQI4 270 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 GATA5Q9BWX5 397 aaPredicted RBP5.86□□□□□ -1.47
SHQ1-205ENST00000468371 XPR1Q9UBH6 696 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 TMEM98Q9Y2Y6 226 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 A0A1B0GTQ1 180 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 TRABD2BA6NFA1 517 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 TOR1BO14657 336 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 PLRG1O43660 514 aaKnown RBP5.86□□□□□ -1.47
SHQ1-205ENST00000468371 ZBTB11O95625 1053 aaPredicted RBP5.86□□□□□ -1.47
SHQ1-205ENST00000468371 MT-CO3P00414 261 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 APOA4P06727 396 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 C1SP09871 688 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 ATXN1LP0C7T5 689 aaKnown RBP5.86□□□□□ -1.47
SHQ1-205ENST00000468371 CCNYL3P0C7X3 344 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 PCNAP12004 261 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 HLA-DPA1P20036 260 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 MAGP20916 626 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 LPOP22079 712 aaPredicted RBP5.86□□□□□ -1.47
SHQ1-205ENST00000468371 EPHA8P29322 1005 aaPredicted RBP5.86□□□□□ -1.47
SHQ1-205ENST00000468371 SERPINB1P30740 379 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 MTTPP55157 894 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 XIAPP98170 497 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 NRG1Q02297 640 aaPredicted RBP5.86□□□□□ -1.47
SHQ1-205ENST00000468371 LSAMPQ13449 338 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 FGL2Q14314 439 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 NFATC4Q14934 902 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 PTPRNQ16849 979 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 C11orf91Q3C1V1 193 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 TNFAIP8L3Q5GJ75 292 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 DET1Q7L5Y6 550 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 PLD3Q8IV08 490 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 MICU2Q8IYU8 434 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 MAML2Q8IZL2 1156 aaPredicted RBP5.86□□□□□ -1.47
SHQ1-205ENST00000468371 MIER2Q8N344 545 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 DHRSXQ8N5I4 330 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 ZNF555Q8NEP9 628 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 WDR36Q8NI36 951 aaKnown RBP5.86□□□□□ -1.47
SHQ1-205ENST00000468371 RP9Q8TA86 221 aaKnown RBP5.86□□□□□ -1.47
SHQ1-205ENST00000468371 DNAJB14Q8TBM8 379 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 IFI44Q8TCB0 444 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 LPGAT1Q92604 370 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 MFSD3Q96ES6 412 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 CEP19Q96LK0 163 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 SPATA13Q96N96 652 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 BTBD9Q96Q07 612 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 COPS8Q99627 209 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 TRIM54Q9BYV2 358 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 OCEL1Q9H607 264 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 CLK4Q9HAZ1 481 aaKnown RBP5.86□□□□□ -1.47
SHQ1-205ENST00000468371 KCNK13Q9HB14 408 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 GLOD4Q9HC38 313 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.86□□□□□ -1.47
SHQ1-205ENST00000468371 LRIT1Q9P2V4 623 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.86□□□□□ -1.47
SHQ1-205ENST00000468371 SARDHQ9UL12 918 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 COLEC10Q9Y6Z7 277 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 TTC24A2A3L6 582 aaPredicted RBP5.86□□□□□ -1.47
SHQ1-205ENST00000468371 ANTXRLA6NF34 631 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 MYO1GB0I1T2 1018 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 SUPT3HB4E1H0 165 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 TRIM38O00635 465 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 KLK10O43240 276 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 SIGLEC6O43699 453 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 DEAF1O75398 565 aaPredicted RBP5.86□□□□□ -1.47
SHQ1-205ENST00000468371 FGF1P05230 155 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 TIMP2P16035 220 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 TFEBP19484 476 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 NFKB1P19838 968 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 ETV3P41162 512 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 CDH13P55290 713 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 KCNK10P57789 538 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 RPL26P61254 145 aaKnown RBP5.86□□□□□ -1.47
SHQ1-205ENST00000468371 ARF5P84085 180 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 IRF9Q00978 393 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 SLC18A2Q05940 514 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 CCNIQ14094 377 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 DGCR6Q14129 220 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 ZNF460Q14592 562 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 TEX44Q53QW1 395 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 SGO1Q5FBB7 561 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 HES3Q5TGS1 186 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 IL23RQ5VWK5 629 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 LRRC66Q68CR7 880 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 ZNF470Q6ECI4 717 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 TBC1D19Q8N5T2 526 aa5.86□□□□□ -1.47
SHQ1-205ENST00000468371 ADCY4Q8NFM4 1077 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms