RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 OR9I1Q8NGQ6 314 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 RNFT2Q96EX2 444 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 BRINP2Q9C0B6 783 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 LMAN2LQ9H0V9 348 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 FBXW2Q9UKT8 454 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 RIMKLBQ9ULI2 386 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 CLDN4O14493 209 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 TRIM24O15164 1050 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 TGFB1P01137 390 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 HOXB2P14652 356 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 HTRA3P83110 453 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 HSPB3Q12988 150 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 MTAPQ13126 283 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 ELAVL3Q14576 367 aaKnown RBP13.48□□□□□ -0.25
BRAT1-203ENST00000467558 IRAK1BP1Q5VVH5 260 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 PSAPL1Q6NUJ1 521 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 THAP5Q7Z6K1 395 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 NUDT13Q86X67 352 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 NATD1Q8N6N6 113 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 ANKLE1Q8NAG6 615 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 RAB7BQ96AH8 199 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 SMAD5Q99717 465 aaKnown RBP13.48□□□□□ -0.25
BRAT1-203ENST00000467558 OSER1Q9NX31 292 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 CITO14578 2027 aa13.48□□□□□ -0.25
BRAT1-203ENST00000467558 DRGXA6NNA5 263 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 E7ENX8 843 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 TNFRSF11BO00300 401 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 KMOO15229 486 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 OAS1P00973 400 aaKnown RBP13.47□□□□□ -0.25
BRAT1-203ENST00000467558 HIST1H2ABP04908 130 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 CYP4B1P13584 511 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 KCNC3Q14003 757 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 C16orf72Q14CZ0 275 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 C6orf52Q5T4I8 152 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 ERN2Q76MJ5 926 aaKnown RBP13.47□□□□□ -0.25
BRAT1-203ENST00000467558 HIST3H2AQ7L7L0 130 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 ARHGAP12Q8IWW6 846 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 APCDD1Q8J025 514 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 C12orf76Q8N812 135 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-203ENST00000467558 HM13Q8TCT9 377 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 HIST1H2ACQ93077 130 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 GLYATL1Q969I3 302 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 C6orf62Q9GZU0 229 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-203ENST00000467558 AK5Q9Y6K8 562 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 PHIPQ8WWQ0 1821 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 A0A1W2PRB8 838 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 H3BNH8 94 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 PDPK1O15530 556 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 NDUFB5O43674 189 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 DLGAP3O95886 979 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 LYNP07948 512 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 SRPRAP08240 638 aaKnown RBP13.47□□□□□ -0.25
BRAT1-203ENST00000467558 EFNA1P20827 205 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-203ENST00000467558 PTX3P26022 381 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-203ENST00000467558 CDK9P50750 372 aaKnown RBP13.47□□□□□ -0.25
BRAT1-203ENST00000467558 MRPL28Q13084 256 aaKnown RBP13.47□□□□□ -0.25
BRAT1-203ENST00000467558 LRRC32Q14392 662 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 SLC9A5Q14940 896 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 ZDHHC21Q8IVQ6 265 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 SVOPLQ8N434 492 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 C1orf52Q8N6N3 182 aaKnown RBP13.47□□□□□ -0.25
BRAT1-203ENST00000467558 TEX47Q8TBZ9 253 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 HMGB4Q8WW32 186 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 SMARCD2Q92925 531 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 KCNA7Q96RP8 456 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 ZIC5Q96T25 663 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 PRDM8Q9NQV8 689 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 CALML5Q9NZT1 146 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 RREB1Q92766 1687 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 ACRV1P26436 265 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 CCR10P46092 362 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 DGKQP52824 942 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 ITGA1P56199 1179 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 SIM2Q14190 667 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-203ENST00000467558 NR1D2Q14995 579 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 SPANXN2Q5MJ10 180 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 VN1R5Q7Z5H4 357 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 TRAM1L1Q8N609 369 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 PIK3C3Q8NEB9 887 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 VANGL1Q8TAA9 524 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-203ENST00000467558 SLC9A6Q92581 669 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 OLFM1Q99784 485 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 SGIP1Q9BQI5 828 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 CXCL16Q9H2A7 254 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 FANCEQ9HB96 536 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 GSTK1Q9Y2Q3 226 aa13.47□□□□□ -0.25
BRAT1-203ENST00000467558 CCNA2P20248 432 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 NT5EP21589 574 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 FDXRP22570 491 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 CTSKP43235 329 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 ACADVLP49748 655 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 CLK3P49761 638 aaKnown RBP13.46□□□□□ -0.25
BRAT1-203ENST00000467558 ATP4BP51164 291 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 LARS2Q15031 903 aaKnown RBP13.46□□□□□ -0.25
BRAT1-203ENST00000467558 DHCR24Q15392 516 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 AMER2Q8N7J2 671 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 WDR36Q8NI36 951 aaKnown RBP13.46□□□□□ -0.25
BRAT1-203ENST00000467558 TSPEARQ8WU66 669 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 BTBD1Q9H0C5 482 aa13.46□□□□□ -0.25
BRAT1-203ENST00000467558 FBRSL1Q9HCM7 1045 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms