RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 CTAGE8P0CG41 777 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 ALPPL2P10696 532 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 POLR2CP19387 275 aaPredicted RBP3.6□□□□□ -1.83
VPS50-209ENST00000467326 ANOS1P23352 680 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 PTPN3P26045 913 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 PBX3P40426 434 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 MAGEA4P43358 317 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 SNU13P55769 128 aaKnown RBP3.6□□□□□ -1.83
VPS50-209ENST00000467326 KIAA1024LP59773 190 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 ACTR1AP61163 376 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 ISL1P61371 349 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 TUBB4BP68371 445 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 PRKCEQ02156 737 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 GABPB1Q06547 395 aaPredicted RBP3.6□□□□□ -1.83
VPS50-209ENST00000467326 CSTF3Q12996 717 aaKnown RBP3.6□□□□□ -1.83
VPS50-209ENST00000467326 DECR1Q16698 335 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 TWISTNBQ3B726 338 aaPredicted RBP3.6□□□□□ -1.83
VPS50-209ENST00000467326 ZSCAN23Q3MJ62 389 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 CAVIN4Q5BKX8 364 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 GKAP1Q5VSY0 366 aaPredicted RBP3.6□□□□□ -1.83
VPS50-209ENST00000467326 SFMBT2Q5VUG0 894 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 C19orf48Q6RUI8 117 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 RBM43Q6ZSC3 357 aaKnown RBP3.6□□□□□ -1.83
VPS50-209ENST00000467326 ASB18Q6ZVZ8 466 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 KCTD8Q6ZWB6 473 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 TAF8Q7Z7C8 310 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 CTAGE6Q86UF2 777 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 NFE4Q86UQ8 179 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 NRROSQ86YC3 692 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 CTAGE4Q8IX94 777 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 MINDY1Q8N5J2 469 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 METTL27Q8N6F8 245 aaPredicted RBP3.6□□□□□ -1.83
VPS50-209ENST00000467326 NEK11Q8NG66 645 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 OR56B2PQ8NGI1 322 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 OR5R1Q8NH85 324 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 OR14L1PQ8NHC6 308 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 THAP6Q8TBB0 222 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 URGCPQ8TCY9 931 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 LRRC8CQ8TDW0 803 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 SLC13A3Q8WWT9 602 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 THRSPQ92748 146 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 ARHGEF26Q96DR7 871 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 PERPQ96FX8 193 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 COG3Q96JB2 828 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 KCNK16Q96T55 309 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 EGFL8Q99944 293 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 KIFC3Q9BVG8 833 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 NUP85Q9BW27 656 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 FKRPQ9H9S5 495 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 FBRSL1Q9HCM7 1045 aaKnown RBP3.6□□□□□ -1.83
VPS50-209ENST00000467326 ZNF334Q9HCZ1 680 aaPredicted RBP3.6□□□□□ -1.83
VPS50-209ENST00000467326 TM9SF3Q9HD45 589 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 ARHGEF38Q9NXL2 777 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 PSD3Q9NYI0 1048 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 TRPC4Q9UBN4 977 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 ZMAT5Q9UDW3 170 aaKnown RBP3.6□□□□□ -1.83
VPS50-209ENST00000467326 FETUBQ9UGM5 382 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 PTBP2Q9UKA9 531 aaKnown RBP3.6□□□□□ -1.83
VPS50-209ENST00000467326 FBXL2Q9UKC9 423 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 NENFQ9UMX5 172 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 RPH3AQ9Y2J0 694 aaPredicted RBP3.6□□□□□ -1.83
VPS50-209ENST00000467326 JRKLQ9Y4A0 524 aa3.6□□□□□ -1.83
VPS50-209ENST00000467326 ZNF644Q9H582 1327 aaPredicted RBP3.6□□□□□ -1.83
VPS50-209ENST00000467326 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 A0A1W2PQF6 199 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 OR2A25A4D2G3 310 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 HTR3EA5X5Y0 456 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 OOEPA6NGQ2 149 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 LRRIQ4A6NIV6 560 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 SLC9B1P1A6NJY1 282 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 A8MZ25 164 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 M0QX08 132 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 M0QZ24 198 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 DVL1O14640 695 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 CTAGE5O15320 804 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 ZNHIT1O43257 154 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 GMFGO60234 142 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 SIX3O95343 332 aaPredicted RBP3.59□□□□□ -1.83
VPS50-209ENST00000467326 TPBGLP0DKB5 382 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 GZMAP12544 262 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 GDI1P31150 447 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 KHKP50053 298 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 GBX2P52951 348 aaPredicted RBP3.59□□□□□ -1.83
VPS50-209ENST00000467326 DVL1P1P54792 670 aaPredicted RBP3.59□□□□□ -1.83
VPS50-209ENST00000467326 CASP9P55211 416 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 EEF1A1P68104 462 aaKnown RBP3.59□□□□□ -1.83
VPS50-209ENST00000467326 ASIC1P78348 528 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 CCNA1P78396 465 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 COG7P83436 770 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 CEBPZQ03701 1054 aaKnown RBP3.59□□□□□ -1.83
VPS50-209ENST00000467326 NIPAL4Q0D2K0 466 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 CUL2Q13617 745 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 GTF2H2Q13888 395 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 RPS6KA1Q15418 735 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 SYCP1Q15431 976 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 SHROOM1Q2M3G4 852 aaPredicted RBP3.59□□□□□ -1.83
VPS50-209ENST00000467326 LETM2Q2VYF4 491 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 SLC39A12Q504Y0 691 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 TMEM35AQ53FP2 167 aa3.59□□□□□ -1.83
VPS50-209ENST00000467326 SIRPB2Q5JXA9 342 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms