RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 ASB3Q9Y575 518 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 NRP1O14786 923 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 TFECO14948 347 aaPredicted RBP8.54□□□□□ -1.04
HPS4-209ENST00000466781 ADAMTS3O15072 1205 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 PCDHGA12O60330 932 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 COL6A1P12109 1028 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 PRKCHP24723 683 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 PTDSS1P48651 473 aaKnown RBP8.54□□□□□ -1.04
HPS4-209ENST00000466781 CRISP3P54108 245 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 TMEM44Q2T9K0 475 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 LRRC73Q5JTD7 316 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 ZNF613Q6PF04 617 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 PLCZ1Q86YW0 608 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 TREML1Q86YW5 311 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 PROKR2Q8NFJ6 384 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 OR6K6Q8NGW6 343 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 OR2L8Q8NGY9 312 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 ACDQ96AP0 544 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 PWWP2AQ96N64 755 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 METTL7AQ9H8H3 244 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 PCDHB3Q9Y5E6 796 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 PKD1L3Q7Z443 1732 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 IGLV3-22A0A075B6J6 115 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 WNT9AO14904 365 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 TGFB1I1O43294 461 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 JMJD7P0C870 316 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 NR2C1P13056 603 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 ACP5P13686 325 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 UGT1A3P35503 534 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 PTGER3P43115 390 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 LCP2Q13094 533 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 GXYLT1Q4G148 440 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 TSTD2Q5T7W7 516 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 SLC39A5Q6ZMH5 540 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 MBOAT1Q6ZNC8 495 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 LRRC55Q6ZSA7 311 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 SLC9B2Q86UD5 537 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 ZNF227Q86WZ6 799 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 MED28Q9H204 178 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 RAB21Q9UL25 225 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 TESMINQ9Y4I5 508 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 PCDHGA11Q9Y5H2 935 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 LTBP4Q8N2S1 1624 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 NEMP2A6NFY4 417 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 ZBTB22O15209 634 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 ALOX15BO15296 676 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 INPPL1O15357 1258 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 LINGO3P0C6S8 592 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 YAP1P46937 504 aaKnown RBP8.54□□□□□ -1.04
HPS4-209ENST00000466781 FUT2Q10981 343 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 RFTN1Q14699 578 aaPredicted RBP8.54□□□□□ -1.04
HPS4-209ENST00000466781 MLIPQ5VWP3 458 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 CLEC6AQ6EIG7 209 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 GDPD4Q6W3E5 623 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 LAPTM4BQ86VI4 370 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 TMEM17Q86X19 198 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 ZZZ3Q8IYH5 903 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 CAMKVQ8NCB2 501 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 CPNE2Q96FN4 548 aaPredicted RBP8.54□□□□□ -1.04
HPS4-209ENST00000466781 ZNF514Q96K75 400 aaPredicted RBP8.54□□□□□ -1.04
HPS4-209ENST00000466781 EPYCQ99645 322 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 TBC1D10AQ9BXI6 508 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 B3GNT4Q9C0J1 378 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.54□□□□□ -1.04
HPS4-209ENST00000466781 OSBPL2Q9H1P3 480 aa8.54□□□□□ -1.04
HPS4-209ENST00000466781 RUVBL1Q9Y265 456 aaKnown RBP8.54□□□□□ -1.04
HPS4-209ENST00000466781 A0A1W2PRU2 124 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 SCELO95171 688 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 TACSTD2P09758 323 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 PCSK2P16519 638 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 GSTT1P30711 240 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 ECT2LQ008S8 904 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 SIM2Q14190 667 aaPredicted RBP8.53□□□□□ -1.04
HPS4-209ENST00000466781 IQCHQ86VS3 1027 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 SVOPLQ8N434 492 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 SPERTQ8NA61 448 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 SIPA1Q96FS4 1042 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 ZNF347Q96SE7 839 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 ELAC1Q9H777 363 aaKnown RBP8.53□□□□□ -1.04
HPS4-209ENST00000466781 C4AP0C0L4 1744 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 DUXAA6NLW8 204 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 SAP18O00422 153 aaKnown RBP8.53□□□□□ -1.04
HPS4-209ENST00000466781 NUAK1O60285 661 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 BMP6P22004 513 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 GBX2P52951 348 aaPredicted RBP8.53□□□□□ -1.04
HPS4-209ENST00000466781 SELENOVP59797 346 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 XIAPP98170 497 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 FSTL5Q8N475 847 aaPredicted RBP8.53□□□□□ -1.04
HPS4-209ENST00000466781 PRELID2Q8N945 189 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 TRIB2Q92519 343 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 TNFRSF25Q93038 417 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 CPXM1Q96SM3 734 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 GAL3ST1Q99999 423 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 TPK1Q9H3S4 243 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 TBC1D17Q9HA65 648 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 CHRAC1Q9NRG0 131 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 NCDNQ9UBB6 729 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 EIF2B4Q9UI10 523 aaKnown RBP8.53□□□□□ -1.04
HPS4-209ENST00000466781 FZD10Q9ULW2 581 aa8.53□□□□□ -1.04
HPS4-209ENST00000466781 SNX10Q9Y5X0 201 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms